RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ALPLP05186 524 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 TACR3P29371 465 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 PLAC9Q5JTB6 97 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 CLEC1AQ8NC01 280 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 C14orf79Q96F83 325 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 SEC22CQ9BRL7 303 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 ARV1Q9H2C2 271 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 NKX2-4Q9H2Z4 354 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 GNG12Q9UBI6 72 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 STEAP1Q9UHE8 339 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 AQP9O43315 295 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 TIMM8AO60220 97 aaPredicted RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 CPMP14384 443 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 DPP4P27487 766 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 IMPA1P29218 277 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 HMGN3Q15651 99 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 OR56B1Q8NGI3 324 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 NTMT1Q9BV86 223 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 PLK3Q9H4B4 646 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 ERVMER34-1Q9H9K5 563 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 GHRLQ9UBU3 117 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 EIF3FO00303 357 aaPredicted RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 CCSO14618 274 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 GLSO94925 669 aaPredicted RBP14.36□□□□□ -0.11
CHD4-210ENST00000544040 SLC1A3P43003 542 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 OR1D4P47884 311 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 SUSD2Q9UGT4 822 aa14.36□□□□□ -0.11
CHD4-210ENST00000544040 C1orf105O95561 183 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ZNF728P0DKX0 622 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 CATR1Q13166 79 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 RPE65Q16518 533 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 EMC10Q5UCC4 262 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 TCEAL8Q8IYN2 117 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 TNFRSF13CQ96RJ3 184 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 TINAGL1Q9GZM7 467 aaPredicted RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 ARNTLO00327 626 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 KCNK5O95279 499 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 LAP3P28838 519 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 OPRD1P41143 372 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ELLP55199 621 aaPredicted RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 NR0B2Q15466 257 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 PRICKLE2Q7Z3G6 844 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 OR6V1Q8N148 313 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 FAM173AQ9BQD7 235 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 GNB4Q9HAV0 340 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 MRPL33O75394 65 aaKnown RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 THBS1P07996 1170 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 RD3LP0DJH9 198 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 SUOXP51687 545 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 INHBCP55103 352 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 PHYHD1Q5SRE7 291 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 PRSS45Q7RTY3 260 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ABHD4Q8TB40 342 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 PEAK1Q9H792 1746 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ZNF217O75362 1048 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 CLEC2LP0C7M8 214 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 AADACP22760 399 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 EIF2DP41214 584 aaKnown RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 ZNF140P52738 457 aaPredicted RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
CHD4-210ENST00000544040 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 Q6ZTK2 550 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 C15orf54Q8N8G6 183 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 SLC35B4Q969S0 331 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 EMC9Q9Y3B6 208 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 A8MVM7 634 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 HBE1P02100 147 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 TCRBP04435 133 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ACTBL2Q562R1 376 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 NHSL2Q5HYW2 709 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 ZNF852Q6ZMS4 543 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 GAREM2Q75VX8 874 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 MMP21Q8N119 569 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 NECAP1Q8NC96 275 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 CASD1Q96PB1 797 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 NMNAT3Q96T66 252 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 NIPSNAP3BQ9BS92 247 aa14.35□□□□□ -0.11
CHD4-210ENST00000544040 TMEM235A6NFC5 223 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 HBG1P69891 147 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 HBG2P69892 147 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 KCNJ10P78508 379 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 OR1S2Q8NGQ3 325 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 OR8U1Q8NH10 309 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 ALG12Q9BV10 488 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 SIAEQ9HAT2 523 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 UBQLN4Q9NRR5 601 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 NXT1Q9UKK6 140 aaKnown RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 SEC14L6B5MCN3 397 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 AIFM1O95831 613 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 NPY4RP50391 375 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 PCBD1P61457 104 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 SLC7A9P82251 487 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 PLK5Q496M5 336 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 TMEM40Q8WWA1 233 aa14.34□□□□□ -0.11
CHD4-210ENST00000544040 ZBED3Q96IU2 234 aaPredicted RBP14.34□□□□□ -0.11
CHD4-210ENST00000544040 SLC22A7Q9Y694 548 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms