RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 FNDC3BQ53EP0 1204 aaKnown RBP11.65□□□□□ -0.54
SMG8-202ENST00000543872 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
SMG8-202ENST00000543872 C17orf64Q86WR6 236 aa11.65□□□□□ -0.54
SMG8-202ENST00000543872 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
SMG8-202ENST00000543872 NUDT13Q86X67 352 aa11.65□□□□□ -0.54
SMG8-202ENST00000543872 UCK1Q9HA47 277 aa11.65□□□□□ -0.54
SMG8-202ENST00000543872 USP36Q9P275 1121 aaKnown RBP11.65□□□□□ -0.54
SMG8-202ENST00000543872 ARGFXA6NJG6 315 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 MAN2B1O00754 1011 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 GNRH1P01148 92 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 HPGDP15428 266 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 ACTR1AP61163 376 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 RPS11P62280 158 aaKnown RBP eCLIP11.65□□□□□ -0.55
SMG8-202ENST00000543872 TMPRSS12Q86WS5 348 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 GJD3Q8N144 294 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 SDR9C7Q8NEX9 313 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 COL26A1Q96A83 441 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 FAM117AQ9C073 453 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.55
SMG8-202ENST00000543872 OR2AG1Q9H205 316 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 POFUT1Q9H488 388 aa11.65□□□□□ -0.55
SMG8-202ENST00000543872 CHMP1AQ9HD42 196 aaPredicted RBP11.65□□□□□ -0.55
SMG8-202ENST00000543872 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 BHLHE40O14503 412 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 VEGFDO43915 354 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 POP4O95707 220 aaKnown RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 MAPK3P27361 379 aaPredicted RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 AGTR1P30556 359 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 DUSP2Q05923 314 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 FABP9Q0Z7S8 132 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 C22orf39Q6P5X5 142 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 CMTM8Q8IZV2 173 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 WDSUB1Q8N9V3 476 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 RAB7BQ96AH8 199 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 ZC3H10Q96K80 434 aaKnown RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 NKX3-1Q99801 234 aaPredicted RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 RSRP1Q9BUV0 290 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 MS4A8Q9BY19 250 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 LOC100509620A0A075B734 347 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 DBX1A6NMT0 343 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 KLF4O43474 513 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 CD3DP04234 171 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 HMGA1P17096 107 aaKnown RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 PDX1P52945 283 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 HABP2Q14520 560 aaPredicted RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 ODF4Q2M2E3 257 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 GLT8D1Q68CQ7 371 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 FRRS1Q6ZNA5 592 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 DPPA4Q7L190 304 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 GLYATL1Q969I3 302 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 C14orf79Q96F83 325 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 SLITRK2Q9H156 845 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 APMAPQ9HDC9 416 aa11.64□□□□□ -0.55
SMG8-202ENST00000543872 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
SMG8-202ENST00000543872 TRAV18A0A075B6X5 111 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 A0A1B0GWJ7 208 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 METTL21EPA6NDL7 271 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 CLN5O75503 358 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MAS1P04201 325 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MC3RP41968 323 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 CST9Q5W186 159 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 ETV3LQ6ZN32 361 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 KCNRGQ8N5I3 272 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 OR52E2Q8NGJ4 325 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 BRI3BPQ8WY22 251 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 TCF7L1Q9HCS4 588 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 KRCC1Q9NPI7 259 aaPredicted RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 CMC2Q9NRP2 79 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 PLXNB3Q9ULL4 1909 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 FAM171A2A8MVW0 826 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 NDUFS4O43181 175 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 BCL2L11O43521 198 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 AQP2P41181 271 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 PNLIPRP2P54317 469 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 UQCC3Q6UW78 93 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 OR5AR1Q8NGP9 310 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 HAVCR1Q96D42 359 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 C19orf43Q9BQ61 176 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 AIF1LQ9BQI0 150 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 TRPV4Q9HBA0 871 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 LHX9Q9NQ69 397 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 SLC35A3Q9Y2D2 325 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MYOFQ9NZM1 2061 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 ZNF106Q9H2Y7 1883 aaKnown RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 A0A1B0GVT2 93 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 A0A1W2PPE3 182 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 NEDD8-MDP1E9PL57 170 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 AGPAT2O15120 278 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 FBXO45P0C2W1 286 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MUC1P15941 1255 aaPredicted RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 SLC11A1P49279 550 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms