RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ZNF443Q9Y2A4 671 aaPredicted RBP19.6■□□□□ 0.73
CDKN3-207ENST00000543789 RPL36A-HNRNPH2H7BZ11 118 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 RFXANKO14593 260 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 LILRA1O75019 489 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 AHSA1O95433 338 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 PRG2P13727 222 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 SRP14P37108 136 aaKnown RBP19.59■□□□□ 0.73
CDKN3-207ENST00000543789 CRISP3P54108 245 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 CLDN17P56750 224 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 VSNL1P62760 191 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 ARF1P84077 181 aaKnown RBP19.59■□□□□ 0.73
CDKN3-207ENST00000543789 STX3Q13277 289 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 SPATA21Q7Z572 469 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 ZNF786Q8N393 782 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 SVOPLQ8N434 492 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 SLC25A36Q96CQ1 311 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 ARMC7Q9H6L4 198 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 PCDHB14Q9Y5E9 798 aa19.59■□□□□ 0.73
CDKN3-207ENST00000543789 DSPPQ9NZW4 1301 aa19.58■□□□□ 0.73
CDKN3-207ENST00000543789 TMEM129A0AVI4 362 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 SH3PXD2BA1X283 911 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 CELA3BP08861 270 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 ZNF43P17038 809 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 BGNP21810 368 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 APEX1P27695 318 aaKnown RBP19.58■□□□□ 0.72
CDKN3-207ENST00000543789 IL2RGP31785 369 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 RNF220Q5VTB9 566 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 UBASH3BQ8TF42 649 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 SLC38A5Q8WUX1 472 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 C1orf159Q96HA4 380 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 RCE1Q9Y256 329 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 GPR45Q9Y5Y3 372 aa19.58■□□□□ 0.72
CDKN3-207ENST00000543789 FTCDNL1E5RQL4 147 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 TM9SF1O15321 606 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 SLC43A1O75387 559 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 ZNF432O94892 652 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 PNMTP11086 282 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 ETFAP13804 333 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 ARR3P36575 388 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 CRATP43155 626 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 MVDP53602 400 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 ADRM1Q16186 407 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 ATG16L1Q676U5 607 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 UGT2A3Q6UWM9 527 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 MYPOPQ86VE0 399 aaPredicted RBP19.57■□□□□ 0.72
CDKN3-207ENST00000543789 GLB1L3Q8NCI6 653 aaPredicted RBP19.57■□□□□ 0.72
CDKN3-207ENST00000543789 IL17RDQ8NFM7 739 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 OXGR1Q96P68 337 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 SNX18Q96RF0 628 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 SPATA9Q9BWV2 254 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 CACYBPQ9HB71 228 aaKnown RBP19.57■□□□□ 0.72
CDKN3-207ENST00000543789 SSU72Q9NP77 194 aaKnown RBP19.57■□□□□ 0.72
CDKN3-207ENST00000543789 DYNLRB1Q9NP97 96 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 SLC6A13Q9NSD5 602 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 CHST2Q9Y4C5 530 aa19.57■□□□□ 0.72
CDKN3-207ENST00000543789 IGHV2OR16-5A0A0B4J2B6 119 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 SDHDO14521 159 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 BCHEP06276 602 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 IFNGR1P15260 489 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 GTF2E2P29084 291 aaKnown RBP19.56■□□□□ 0.72
CDKN3-207ENST00000543789 RPS5P46782 204 aaKnown RBP19.56■□□□□ 0.72
CDKN3-207ENST00000543789 RIN1Q13671 783 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 SERPINA11Q86U17 422 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 CCDC36Q8IYA8 594 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 GPR137CQ8N3F9 429 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 AENQ8WTP8 325 aaKnown RBP19.56■□□□□ 0.72
CDKN3-207ENST00000543789 PTDSS2Q9BVG9 487 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 GPR35Q9HC97 309 aa19.56■□□□□ 0.72
CDKN3-207ENST00000543789 A0A0G2JPF8 293 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 HNRNPCL2B2RXH8 293 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 HNRNPCL3B7ZW38 293 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 RGS16O15492 202 aaPredicted RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 HNRNPCL1O60812 293 aaKnown RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 IL6P05231 212 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 ADRA2AP08913 450 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 HNRNPCL4P0DMR1 293 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 CDH15P55291 814 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 DSTNP60981 165 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 EGR4Q05215 589 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 NPRL3Q12980 569 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 C1DQ13901 141 aaKnown RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 DAG1Q14118 895 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 KRT71Q3SY84 523 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 RPS26P11Q5JNZ5 115 aaPredicted RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 CKAP2Q8WWK9 683 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 KTI12Q96EK9 354 aaPredicted RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 TPT1P8Q9HAU6 139 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 CRLF2Q9HC73 371 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 THUMPD1Q9NXG2 353 aaKnown RBP19.55■□□□□ 0.72
CDKN3-207ENST00000543789 B3GAT1Q9P2W7 334 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 IFT52Q9Y366 437 aa19.55■□□□□ 0.72
CDKN3-207ENST00000543789 TMEM247A6NEH6 219 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 IGFBP1P08833 259 aaPredicted RBP19.54■□□□□ 0.72
CDKN3-207ENST00000543789 ITGA2P17301 1181 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 BST1Q10588 318 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 TRIP10Q15642 601 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 CEACAM16Q2WEN9 425 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 MDP1Q86V88 176 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 CDK20Q8IZL9 346 aa19.54■□□□□ 0.72
CDKN3-207ENST00000543789 ZNF837Q96EG3 531 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms