RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SLC38A5Q8WUX1 472 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 C8orf44Q96CB5 159 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 TAAR9Q96RI9 348 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC6A7Q99884 636 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC19A3Q9BZV2 496 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 FIGNL2A6NMB9 653 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 IL2RAP01589 272 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC2A5P22732 501 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF81P51508 661 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 KRTCAP3Q53RY4 240 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 VASNQ6EMK4 673 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 MFSD12Q6NUT3 480 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 MKXQ8IYA7 352 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF610Q8N9Z0 462 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC25A43Q8WUT9 341 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ELP4Q96EB1 424 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 EAF1Q96JC9 268 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC41A2Q96JW4 573 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 NUDT15Q9NV35 164 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM181Q9P2C4 612 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 LOC105369274A0A096LPK9 316 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM230AA0A1W2PPH8 454 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 DCDC2BA2VCK2 349 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GABBR2O75899 941 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 MT-CO3P00414 261 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB3BP20337 219 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 FHITP49789 147 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CCL7P80098 99 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 S100A12P80511 92 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ACVR1Q04771 509 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 RNF113BQ8IZP6 322 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 OR4N4Q8N0Y3 316 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 OR52A5Q9H2C5 316 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 NUP50Q9UKX7 468 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 HHLA2Q9UM44 414 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC17A4Q9Y2C5 497 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GVINP1Q7Z2Y8 2422 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZDBF2Q9HCK1 2354 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TRAV36DV7A0A075B6V5 113 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM269A0A1B0GVZ9 245 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 PRSS44E7EML9 344 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 C5orf67F2Z3F1 127 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GFYI3L273 518 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 NRG2O14511 850 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 PRKYO43930 277 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 OR7A10O76100 309 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 MPIG6BO95866 241 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GYPBP06028 91 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ALDOCP09972 364 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF44P15621 663 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB3AP20336 220 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 AKR1C2P52895 323 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ART1P52961 327 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 PIGFQ07326 219 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 PDE7AQ13946 482 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 PLEKHN1Q494U1 663 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 RNASE10Q5GAN6 216 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 WDR88Q6ZMY6 472 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CPEB2Q7Z5Q1 589 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 LRRC18Q8N456 261 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CITED4Q96RK1 184 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CHST8Q9H2A9 424 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CXorf36Q9H7Y0 433 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC23A2Q9UGH3 650 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CACNA1GO43497 2377 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TTC3P53804 2025 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SERTM2A0A1B0GWG4 89 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 H3BSA7 217 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC1A7O00341 560 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ABCD4O14678 606 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TAPBPO15533 448 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ATG12O94817 140 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 OLFM2O95897 454 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CAPNS1P04632 268 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 NUDT7P0C024 238 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GSTT2P0CG29 244 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF322Q6U7Q0 402 aaPredicted RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 DCDC5Q6ZRR9 648 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 Q6ZSR9 355 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF687Q8N1G0 1237 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ENDOVQ8N8Q3 282 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC16A11Q8NCK7 471 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 CSNK2A3Q8NEV1 391 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 GRPEL2Q8TAA5 225 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 TCEAL3Q969E4 200 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 DUSP13Q9UII6 198 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 LHX6Q9UPM6 363 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 OR51B4Q9Y5P0 310 aa6.38□□□□□ -1.39
SRGAP1-206ENST00000543397 ECM29Q5VYK3 1845 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TRGV8A0A0C4DH27 118 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 CLCA1A8K7I4 914 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 TIMM8AO60220 97 aaPredicted RBP6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 ABHD16AO95870 558 aa6.37□□□□□ -1.39
SRGAP1-206ENST00000543397 WNT11O96014 354 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms