RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 LOC102725191A0A1B0GVB3 256 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 OR7A10O76100 309 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 GADD45GO95257 159 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 ASAH2BP0C7U1 165 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 IFI30P13284 250 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 NQO1P15559 274 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 FUT1P19526 365 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 SPIBQ01892 262 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 PRKCDQ05655 676 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 C1orf146Q5VVC0 180 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 PODNL1Q6PEZ8 512 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 TBPL2Q6SJ96 375 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 RRM2BQ7LG56 351 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 YTHDF3Q7Z739 585 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 LUZP2Q86TE4 346 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 GPAT4Q86UL3 456 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 NRMQ8IXM6 262 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 KDM8Q8N371 416 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 LRRC17Q8N6Y2 441 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF610Q8N9Z0 462 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 OR5J2Q8NH18 312 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 BPIFA2Q96DR5 249 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 OXGR1Q96P68 337 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 FUZQ9BT04 418 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 OPN3Q9H1Y3 402 aaPredicted RBP15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 C12orf49Q9H741 205 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 B3GAT1Q9P2W7 334 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 AURKCQ9UQB9 309 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 NOSIPQ9Y314 301 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 ICE1Q9Y2F5 2266 aa15.19■□□□□ 0.02
RABGGTA-203ENST00000543002 TRBV4-1A0A0J9YWV2 114 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 PRSS44E7EML9 344 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 MS4A18H0YCH9 400 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 PLPP3O14495 311 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 CIB2O75838 187 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 KRT36O76013 467 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 HIST1H2ABP04908 130 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 RRM2P31350 389 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 MS4A18Q3C1V0 323 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 CREB3L2Q70SY1 520 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 HIST3H2AQ7L7L0 130 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 ZIC4Q8N9L1 334 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 OR52J3Q8NH60 311 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 HIST1H2ACQ93077 130 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 RNASE6Q93091 150 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 TMEM45BQ96B21 275 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 LRRC46Q96FV0 321 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 CHID1Q9BWS9 393 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 FOXD3Q9UJU5 478 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 COL12A1Q99715 3063 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 BAHCC1Q9P281 2608 aa15.18■□□□□ 0.02
RABGGTA-203ENST00000543002 HPRP00739 348 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF43P17038 809 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 NTF4P34130 210 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 OR3A2P47893 321 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ERFP50548 548 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 HMGA2P52926 109 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PUDPQ08623 228 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ZP4Q12836 540 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 SEC23BQ15437 767 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF474Q6S9Z5 364 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 TFAP2EQ6VUC0 442 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 NANOGNBQ7Z5D8 188 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 STK32CQ86UX6 486 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 EPHX4Q8IUS5 362 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 CDK20Q8IZL9 346 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PAPD5Q8NDF8 572 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF385AQ96PM9 386 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 RBM24Q9BX46 236 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 FANCFQ9NPI8 374 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 NPDC1Q9NQX5 325 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 CCM2LQ9NUG4 571 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PARPBPQ9NWS1 579 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 TAS2R5Q9NYW4 299 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 TMEM5Q9Y2B1 443 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 SH3PXD2BA1X283 911 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 C19orf84I3L1E1 186 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 MRPL33O75394 65 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 OR6A2O95222 327 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ADORA3P0DMS8 318 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 MAKP20794 623 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 GRNP28799 593 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 LIMS1P48059 325 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PCYT1AP49585 367 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 C1DQ13901 141 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 OR2T5Q6IEZ7 315 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 TMPRSS11FQ6ZWK6 438 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PXKQ7Z7A4 578 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF100Q8IYN0 542 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 OR4K5Q8NGD3 323 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 OR2T29Q8NH02 315 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 RSRC1Q96IZ7 334 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 ALPK1Q96QP1 1244 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 GALNT8Q9NY28 637 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 PLEKHB1Q9UF11 243 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 NOX1Q9Y5S8 564 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 LYVE1Q9Y5Y7 322 aa15.17■□□□□ 0.02
RABGGTA-203ENST00000543002 TRAF3IP2O43734 574 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-203ENST00000543002 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
RABGGTA-203ENST00000543002 SAGP10523 405 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms