RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 HNRNPA2B1P22626 353 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 SOX6P35712 828 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 RPL13AP40429 203 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 KLHL30Q0D2K2 578 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 ELP6Q0PNE2 266 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 C1orf61Q13536 156 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 KIAA0087Q14695 138 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 MESDQ14696 234 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 DUSP7Q16829 419 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 KCTD19Q17RG1 926 aaPredicted RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TMEM183BQ1AE95 376 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 RFX4Q33E94 735 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 LINC00483Q53H64 154 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CARD16Q5EG05 197 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TMEM225Q6GV28 225 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TMEM183AQ8IXX5 376 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 SAXO1Q8IYX7 474 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 IPMKQ8NFU5 416 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 NPBQ8NG41 125 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 OR4F15Q8NGB8 312 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TRMT10AQ8TBZ6 339 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 ZNF596Q8TC21 504 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 SLC22A8Q8TCC7 542 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 MCOLN3Q8TDD5 553 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 DNAJC19Q96DA6 116 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CXorf40BQ96DE9 158 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 ITCHQ96J02 903 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 FAM210BQ96KR6 192 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CLCC1Q96S66 551 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CDC42EP4Q9H3Q1 356 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TPK1Q9H3S4 243 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CCL28Q9NRJ3 127 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 QPCTLQ9NXS2 382 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 RBAKQ9NYW8 714 aaPredicted RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CGNQ9P2M7 1197 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 CLCF1Q9UBD9 225 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 PCYOX1Q9UHG3 505 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TBX21Q9UL17 535 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 MMP17Q9ULZ9 603 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 TMCO1Q9UM00 188 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 RASD1Q9Y272 281 aa1.38□□□□□ -2.19
KNTC1-213ENST00000542727 MRPS33Q9Y291 106 aaKnown RBP1.38□□□□□ -2.19
KNTC1-213ENST00000542727 ATP10AO60312 1499 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 A0A1B0GWJ7 208 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 C12orf77C9JDV5 145 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 F5H6K3 240 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 LOC110117498-PIK3R3F6TDL0 507 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 K7EQM0 130 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 DLGAP1O14490 977 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 MED7O43513 233 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TOM1O60784 492 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 NOL3O60936 208 aaKnown RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SS18L1O75177 396 aaPredicted RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SUPT3HO75486 399 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 WISP3O95389 354 aaPredicted RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TDGF1P13385 188 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 NCK1P16333 377 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SLC2A5P22732 501 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 OTX2P32243 289 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 DDOSTP39656 456 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 MAP3K8P41279 467 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 CASP4P49662 377 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 PPT1P50897 306 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TDGF1P3P51864 188 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 KLRC3Q07444 240 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ASPHQ12797 758 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SMARCB1Q12824 385 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 VGLL4Q14135 290 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 GANABQ14697 944 aaKnown RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 DPYSL2Q16555 572 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 RSPO1Q2MKA7 263 aaPredicted RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 DEFB116Q30KQ4 102 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ZBED5Q49AG3 693 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TTC23Q5W5X9 447 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SLC25A24Q6NUK1 477 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 C1orf94Q6P1W5 598 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 CNIH2Q6PI25 160 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ZNF546Q86UE3 836 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TTC5Q8N0Z6 440 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ZNF561Q8N587 486 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 FNDC5Q8NAU1 212 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 GIMAP1Q8WWP7 306 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 STARD8Q92502 1023 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 UFD1Q92890 307 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 UBE2E3Q969T4 207 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SENP8Q96LD8 212 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 FOPNLQ96NB1 174 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 OXGR1Q96P68 337 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 RBM14Q96PK6 669 aaKnown RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TAAR1Q96RJ0 339 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ZNF607Q96SK3 696 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 TMEM246Q9BRR3 403 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 RAB33BQ9H082 229 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 GBA3Q9H227 469 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 LRRN3Q9H3W5 708 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 NHEJ1Q9H9Q4 299 aaPredicted RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 SLCO1B3Q9NPD5 702 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 DMAP1Q9NPF5 467 aaPredicted RBP1.37□□□□□ -2.19
KNTC1-213ENST00000542727 IL26Q9NPH9 171 aa1.37□□□□□ -2.19
KNTC1-213ENST00000542727 ZNF282Q9UDV7 671 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms