RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 USH1CQ9Y6N9 552 aa17.28■□□□□ 0.36
DDX11-220ENST00000542244 SVEP1Q4LDE5 3571 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 SLC35F4A4IF30 521 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 ZNF587BE7ETH6 402 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 SLCO1B7G3V0H7 640 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 SEC14L2O76054 403 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 WNT11O96014 354 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 HPRP00739 348 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 BMP2P12643 396 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 SLC18A1P54219 525 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 DSCR9P59020 149 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 ADIPOQQ15848 244 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 CHRFAM7AQ494W8 412 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 KLHL24Q6TFL4 600 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 MSANTD1Q6ZTZ1 278 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 IL17RELQ6ZVW7 336 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 REPIN1Q9BWE0 567 aaKnown RBP17.27■□□□□ 0.36
DDX11-220ENST00000542244 PIF1Q9H611 641 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 RMND5AQ9H871 391 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 SLCO1B3Q9NPD5 702 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 ZNF232Q9UNY5 417 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 RASD1Q9Y272 281 aa17.27■□□□□ 0.36
DDX11-220ENST00000542244 STAB1Q9NY15 2570 aa17.27■□□□□ 0.35
DDX11-220ENST00000542244 A0A1B0GWA3 101 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 M0R082 166 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 TPST2O60704 377 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 AHSA1O95433 338 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 IGFBP1P08833 259 aaPredicted RBP17.26■□□□□ 0.35
DDX11-220ENST00000542244 HLA-DOBP13765 273 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 SLC25A16P16260 332 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 NAAAQ02083 359 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 CHRNB3Q05901 458 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 ZCCHC24Q8N2G6 241 aaKnown RBP17.26■□□□□ 0.35
DDX11-220ENST00000542244 ZNF417Q8TAU3 575 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 FOXN4Q96NZ1 517 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 ZNF587Q96SQ5 575 aaPredicted RBP17.26■□□□□ 0.35
DDX11-220ENST00000542244 KCNK17Q96T54 332 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 SOX7Q9BT81 388 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 CA10Q9NS85 328 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 NKIRAS1Q9NYS0 192 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 CRNNQ9UBG3 495 aaPredicted RBP17.26■□□□□ 0.35
DDX11-220ENST00000542244 IFT52Q9Y366 437 aa17.26■□□□□ 0.35
DDX11-220ENST00000542244 ARPC4-TTLL3A0A0A6YYG9 625 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 IGHV4-61A0A0C4DH41 118 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 FZD7O75084 574 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 IGLV1-44P01699 117 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 OR4A8P0C604 315 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 USF1P22415 310 aaPredicted RBP17.25■□□□□ 0.35
DDX11-220ENST00000542244 IDH3AP50213 366 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 GGTLC2Q14390 218 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 VRK1Q99986 396 aaPredicted RBP17.25■□□□□ 0.35
DDX11-220ENST00000542244 LINC00470Q9BZP3 86 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 NOX3Q9HBY0 568 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 GPR35Q9HC97 309 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 VAPAQ9P0L0 249 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 PMF1-BGLAPU3KQ54 211 aa17.25■□□□□ 0.35
DDX11-220ENST00000542244 A0A096LPI6 279 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 LRRN3E7EW58 273 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 PHF1O43189 567 aaPredicted RBP17.24■□□□□ 0.35
DDX11-220ENST00000542244 VAMP5O95183 116 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 ARAFP10398 606 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 GRPRP30550 384 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 SERPINF1P36955 418 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 UBE2NP61088 152 aaKnown RBP17.24■□□□□ 0.35
DDX11-220ENST00000542244 LSM11P83369 360 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX11-220ENST00000542244 CARTPTQ16568 116 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 MSMPQ1L6U9 139 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 BEND6Q5SZJ8 279 aaPredicted RBP17.24■□□□□ 0.35
DDX11-220ENST00000542244 LRIF1Q5T3J3 769 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 PODNL1Q6PEZ8 512 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 C6orf89Q6UWU4 347 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 NHLRC1Q6VVB1 395 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 CROCCP2Q86T23 111 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 TMEM123Q8N131 208 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 BBS10Q8TAM1 723 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 OR2M2Q96R28 347 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 KATNB1Q9BVA0 655 aa17.24■□□□□ 0.35
DDX11-220ENST00000542244 TRBV5-3A0A0A0MS03 114 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 TMEM129A0AVI4 362 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 MS4A18H0YCH9 400 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 TRAF3IP2O43734 574 aaPredicted RBP17.23■□□□□ 0.35
DDX11-220ENST00000542244 FAM157CP0CG43 387 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 IGFBP5P24593 272 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 THBS4P35443 961 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 NR4A2P43354 598 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 ADRM1Q16186 407 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 CEACAM16Q2WEN9 425 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 MS4A18Q3C1V0 323 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 CARD17Q5XLA6 110 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 CYB5R2Q6BCY4 276 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 BLOC1S3Q6QNY0 202 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 ABHD12BQ7Z5M8 362 aaPredicted RBP17.23■□□□□ 0.35
DDX11-220ENST00000542244 MAGEE2Q8TD90 523 aaPredicted RBP17.23■□□□□ 0.35
DDX11-220ENST00000542244 PROX1Q92786 737 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 MSI2Q96DH6 328 aaKnown RBP17.23■□□□□ 0.35
DDX11-220ENST00000542244 TXNDC15Q96J42 360 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 OXGR1Q96P68 337 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 EMC6Q9BV81 110 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 OBP2BQ9NPH6 170 aa17.23■□□□□ 0.35
DDX11-220ENST00000542244 KLHL14Q9P2G3 628 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms