RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 FLRT2O43155 660 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 NDUFS4O43181 175 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 FMO6PO60774 539 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 KCNJ13O60928 360 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PTP4A3O75365 173 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 KHDRBS3O75525 346 aaKnown RBP8.37□□□□□ -1.07
THBS3-211ENST00000541990 GIPP09681 153 aaPredicted RBP8.37□□□□□ -1.07
THBS3-211ENST00000541990 GKN3PP0CG01 181 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PSMB10P40306 273 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 RPS11P62280 158 aaKnown RBP eCLIP8.37□□□□□ -1.07
THBS3-211ENST00000541990 CRMP1Q14194 572 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 NKAIN2Q5VXU1 208 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ZNF613Q6PF04 617 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 MBOAT2Q6ZWT7 520 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 NUDT13Q86X67 352 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 GJD3Q8N144 294 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 WNT2BQ93097 391 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 TEAD3Q99594 435 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
THBS3-211ENST00000541990 ATPIF1Q9UII2 106 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 SLC13A4Q9UKG4 626 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PTPRZ1P23471 2315 aaPredicted RBP8.37□□□□□ -1.07
THBS3-211ENST00000541990 A0A1W2PPC4 97 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 OR6C74A6NCV1 312 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PYCARD-AS1I3L0S3 204 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 IMPA2O14732 288 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 GSTZ1O43708 216 aaPredicted RBP8.37□□□□□ -1.07
THBS3-211ENST00000541990 SBK2P0C263 348 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 CTSEP14091 401 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 TEAD1P28347 426 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 LSSP48449 732 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PITPNAQ00169 270 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 FCRLAQ7L513 359 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 OR9A2Q8NGT5 310 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 OR2A1Q8NGT9 310 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 LMX1AQ8TE12 382 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 SLC37A2Q8TED4 501 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 SMPDL3BQ92485 455 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 FAM131CQ96AQ9 280 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 BBS4Q96RK4 519 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ACTR6Q9GZN1 396 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 AHSPQ9NZD4 102 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 OPN4Q9UHM6 478 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ATG4BQ9Y4P1 393 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 NPIPA5A0A0B4J1W7 369 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PATE3B3GLJ2 98 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 NPIPA7E9PJI5 369 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PIN1P1O15428 100 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ATP1B1P05026 303 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 NPIPA8P0DM63 369 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ACHEP22303 614 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 NAA10P41227 235 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 SSR2P43308 183 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 MAT1AQ00266 395 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 SERTAD2Q14140 314 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 GK2Q14410 553 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 DECR1Q16698 335 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HYAL4Q2M3T9 481 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ZNF626Q68DY1 528 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 GSG1LQ6UXU4 331 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 C17orf64Q86WR6 236 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 KCT2Q8NC54 265 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 FAM71CQ8NEG0 241 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 RSC1A1Q92681 617 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 KLHDC7BQ96G42 594 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PRSS27Q9BQR3 290 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 C7orf50Q9BRJ6 194 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 ESRP2Q9H6T0 727 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 IL21RQ9HBE5 538 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 ACSS1Q9NUB1 689 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 MED17Q9NVC6 651 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 NPFFR2Q9Y5X5 522 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 PCDH15Q96QU1 1955 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 A0A0A6YYD5 115 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 A0A0G2JPF8 293 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 TMEM272A0A1B0GTI8 110 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 A0A1W2PR48 441 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HNRNPCL3B7ZW38 293 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 D6RAR5 112 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 GOSR2O14653 212 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 TBX19O60806 448 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 OR2A4O95047 310 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 OR5F1O95221 314 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 LDOC1O95751 146 aaPredicted RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 HIST1H2ABP04908 130 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HNRNPCL4P0DMR1 293 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 IFNGR1P15260 489 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 RAB3AP20336 220 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 NT5EP21589 574 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 HTR2AP28223 471 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 CBX5P45973 191 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 CXCL12P48061 93 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 GDI2P50395 445 aaKnown RBP8.36□□□□□ -1.07
THBS3-211ENST00000541990 ERVK-25P63136 954 aa8.36□□□□□ -1.07
THBS3-211ENST00000541990 RIPPLY1Q0D2K3 151 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms