RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 FGF11Q92914 225 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 THOC3Q96J01 351 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 TEX12Q9BXU0 123 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PCDHGB6Q9Y5F9 930 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 HRH3Q9Y5N1 445 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TRAV27A0A087WT01 109 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 IGLV3-32A0A0A0MS00 114 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 FAM172BPA6NC97 362 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 LRRN3E7EW58 273 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 HCN1O60741 890 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 ENTPD6O75354 484 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TSPAN9O75954 239 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SLC15A1P46059 708 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 POLR2HP52434 150 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 SNRPGP62308 76 aaKnown RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 CSNK2BP67870 215 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 FHL1Q13642 323 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SNAPC1Q16533 368 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 ACER2Q5QJU3 275 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PRAMEF20Q5VT98 475 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 JMJD6Q6NYC1 403 aaPredicted RBP7.88□□□□□ -1.15
THBS3-210ENST00000541576 SMARCD3Q6STE5 483 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 MINDY2Q8NBR6 621 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR2T33Q8NG76 320 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR51A7Q8NH64 312 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 GGHQ92820 318 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SGCZQ96LD1 299 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SLC38A2Q96QD8 506 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 OR2B2Q9GZK3 357 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 HHATLQ9HCP6 504 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 ACOT13Q9NPJ3 140 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PLCXD1Q9NUJ7 323 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 PSORS1C1Q9UIG5 152 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 SIGLEC7Q9Y286 467 aa7.88□□□□□ -1.15
THBS3-210ENST00000541576 TLX2O43763 284 aaPredicted RBP7.87□□□□□ -1.15
THBS3-210ENST00000541576 GFRA3O60609 400 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 PTP4A3O75365 173 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 CH25HO95992 272 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 IGF2P01344 180 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 LIFP15018 202 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 HTR3AP46098 478 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 EGR4Q05215 589 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 ZNF544Q6NX49 715 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 TMEM81Q6P7N7 255 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 THSD4Q6ZMP0 1018 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 LRRC17Q8N6Y2 441 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 OR6F1Q8NGZ6 308 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 PAQR8Q8TEZ7 354 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 ST8SIA1Q92185 356 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 PSMF1Q92530 271 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 TNFRSF13CQ96RJ3 184 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 POLDIP3Q9BY77 421 aaKnown RBP7.87□□□□□ -1.15
THBS3-210ENST00000541576 C12orf4Q9NQ89 552 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 CLN6Q9NWW5 311 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 STMN3Q9NZ72 180 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 DNAJC27Q9NZQ0 273 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 TMED7-TICAM2A0A0A6YYA0 188 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 DLL1O00548 723 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 CCL3P10147 92 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 ITGA3P26006 1051 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 SLC9A3P48764 834 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 CDK10Q15131 360 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 PGGHGQ32M88 737 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 ZNF468Q5VIY5 522 aaPredicted RBP7.87□□□□□ -1.15
THBS3-210ENST00000541576 SLC22A10Q63ZE4 541 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 TIGD4Q8IY51 512 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 C10orf53Q8N6V4 93 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 IL17RDQ8NFM7 739 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 FER1L6-AS2Q96M78 137 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 SIGLEC11Q96RL6 698 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 UBQLN3Q9H347 655 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 SH2D2AQ9NP31 389 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 ANKRD10Q9NXR5 420 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 GPR83Q9NYM4 423 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 VDAC3Q9Y277 283 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 TMED7Q9Y3B3 224 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 HSPB11Q9Y547 144 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 EML6Q6ZMW3 1958 aa7.87□□□□□ -1.15
THBS3-210ENST00000541576 SH3D21A4FU49 640 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 CLCA1A8K7I4 914 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 H3BUI4 141 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 SLC25A12O75746 678 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 OR7A10O76100 309 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 ALX3O95076 343 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 STSP08842 583 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 ADRA2AP08913 450 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 ZNF41P51814 821 aaPredicted RBP7.86□□□□□ -1.15
THBS3-210ENST00000541576 AIMP2Q13155 320 aaKnown RBP7.86□□□□□ -1.15
THBS3-210ENST00000541576 INPP5JQ15735 1006 aaPredicted RBP7.86□□□□□ -1.15
THBS3-210ENST00000541576 ARSKQ6UWY0 536 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 RTL4Q6ZR62 310 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 SLC46A3Q7Z3Q1 461 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 VASH2Q86V25 355 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 CYP4Z2PQ8N1L4 340 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 STX19Q8N4C7 294 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 FAM26EQ8N5C1 309 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 CLEC1AQ8NC01 280 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 OR4K17Q8NGC6 315 aa7.86□□□□□ -1.15
THBS3-210ENST00000541576 DACT3Q96B18 629 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms