RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 LRP11Q86VZ4 500 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 SNX32Q86XE0 403 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 MUC20Q8N307 709 aaPredicted RBP7.97□□□□□ -1.13
YBX3-211ENST00000541351 GPR137CQ8N3F9 429 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 OR4F6Q8NGB9 312 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 C11orf40Q8WZ69 217 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 PLEKHA8Q96JA3 519 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 CCDC106Q9BWC9 280 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 TRIM15Q9C019 465 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 TMEM165Q9HC07 324 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 NPTNQ9Y639 398 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 TENM2Q9NT68 2774 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 PLSCR5A0PG75 271 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 STX16-NPEPL1H3BU86 382 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 STX16O14662 325 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZNF208O43345 1280 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 OIP5O43482 229 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 DNAJA2O60884 412 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 URI1O94763 535 aaPredicted RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZFPL1O95159 310 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 DUS4LO95620 317 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 CSTAP01040 98 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 SBK2P0C263 348 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 CD79AP11912 226 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZNF35P13682 527 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 CD33P20138 364 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 CD80P33681 288 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 DBPQ10586 325 aaPredicted RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 CAMK2DQ13557 499 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 FXNQ16595 210 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 DMRTC1Q5HYR2 192 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 CDC73Q6P1J9 531 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 NIPAL3Q6P499 406 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 BRD3OSQ6XYD6 125 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 EIF3MQ7L2H7 374 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 GATAD2BQ8WXI9 593 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 DPF1Q92782 380 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZG16BQ96DA0 208 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZNF385AQ96PM9 386 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 GPR61Q9BZJ8 451 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 PIGUQ9H490 435 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 CTPS2Q9NRF8 586 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 FARSBQ9NSD9 589 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 MYEF2Q9P2K5 600 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 ZMAT5Q9UDW3 170 aaKnown RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 FZR1Q9UM11 496 aa7.96□□□□□ -1.14
YBX3-211ENST00000541351 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.96□□□□□ -1.14
YBX3-211ENST00000541351 ARHGAP32A7KAX9 2087 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 IGLV3-9A0A075B6K5 115 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 ZNF816-ZNF321PA0A0X1KG74 233 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 AKAP8O43823 692 aaKnown RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 SMIM24O75264 130 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 RSL1D1O76021 490 aaKnown RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 IMPDH2P12268 514 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 GABRA5P31644 462 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 LIPAP38571 399 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 FNTAP49354 379 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 ZNF81P51508 661 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 ARF1P84077 181 aaKnown RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 SKP2Q13309 424 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 MSMPQ1L6U9 139 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 ZMAT1Q5H9K5 638 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 DCST2Q5T1A1 773 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 GRTP1Q5TC63 336 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 TTC27Q6P3X3 843 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 PTOV1Q86YD1 416 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 PTGR2Q8N8N7 351 aaPredicted RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 OIT3Q8WWZ8 545 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 RAB40AQ8WXH6 277 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 SSBP3Q9BWW4 388 aaPredicted RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 TAPBPLQ9BX59 468 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 BCL2L14Q9BZR8 327 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 SLC19A3Q9BZV2 496 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 NELFAQ9H3P2 528 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 A4GALTQ9NPC4 353 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 CYSLTR2Q9NS75 346 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 FBLN5Q9UBX5 448 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 CGGBP1Q9UFW8 167 aaPredicted RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 EGFL7Q9UHF1 273 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 PCTPQ9UKL6 214 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 FAF1Q9UNN5 650 aaPredicted RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 RCE1Q9Y256 329 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 CAB39Q9Y376 341 aaPredicted RBP7.95□□□□□ -1.14
YBX3-211ENST00000541351 USH1CQ9Y6N9 552 aa7.95□□□□□ -1.14
YBX3-211ENST00000541351 DOCK11Q5JSL3 2073 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 IGHV2-70DA0A0C4DH43 119 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 ANKRD61A6NGH8 418 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 AQP7P3A6NL99 342 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 ZNF99A8MXY4 864 aaPredicted RBP7.94□□□□□ -1.14
YBX3-211ENST00000541351 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 H0YL77 283 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 TNFRSF13BO14836 293 aaPredicted RBP7.94□□□□□ -1.14
YBX3-211ENST00000541351 SLC43A1O75387 559 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 AK1P00568 194 aa7.94□□□□□ -1.14
YBX3-211ENST00000541351 UBTFL6P0CB48 400 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms