RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MS4A18Q3C1V0 323 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 TTC33Q6PID6 262 aaPredicted RBP14.87□□□□□ -0.03
CD9-209ENST00000540891 PAMR1Q6UXH9 720 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 NHLRC1Q6VVB1 395 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 CBLL1Q75N03 491 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 NKAIN4Q8IVV8 208 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 FITM2Q8N6M3 262 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 SCAIQ8N9R8 606 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 HSD17B8Q92506 261 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 KCTD14Q9BQ13 255 aaPredicted RBP14.87□□□□□ -0.03
CD9-209ENST00000540891 USB1Q9BQ65 265 aaKnown RBP14.87□□□□□ -0.03
CD9-209ENST00000540891 AMBRA1Q9C0C7 1298 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 SLCO5A1Q9H2Y9 848 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 MEPEQ9NQ76 525 aaPredicted RBP14.87□□□□□ -0.03
CD9-209ENST00000540891 MRPL39Q9NYK5 338 aaKnown RBP14.87□□□□□ -0.03
CD9-209ENST00000540891 ITGB1BP2Q9UKP3 347 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 PLEKHA6Q9Y2H5 1048 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 CORINQ9Y5Q5 1042 aa14.87□□□□□ -0.03
CD9-209ENST00000540891 CREBBPQ92793 2442 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 OR5H1A6NKK0 313 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 KPNA4O00629 521 aaPredicted RBP14.86□□□□□ -0.03
CD9-209ENST00000540891 ZNF432O94892 652 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 OR5F1O95221 314 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 MT-ATP6P00846 226 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 HLA-DOBP13765 273 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 ZNF43P17038 809 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 CLDN17P56750 224 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 TAS2R41P59536 307 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 TESK1Q15569 626 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 STK11Q15831 433 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 GABRA6Q16445 453 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 ZNF74Q16587 644 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 TIMM23BQ5SRD1 257 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 C9orf135Q5VTT2 229 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 ALKBH2Q6NS38 261 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 NIPAL3Q6P499 406 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 LINGO2Q7L985 606 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 PGAM4Q8N0Y7 254 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 RNF148Q8N7C7 305 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 NINJ1Q92982 152 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 PLPPR2Q96GM1 343 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 MUS81Q96NY9 551 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 ASPNQ9BXN1 380 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 SLC19A3Q9BZV2 496 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 POLR2J2Q9GZM3 115 aaKnown RBP14.86□□□□□ -0.03
CD9-209ENST00000540891 POLR2J3Q9H1A7 115 aaKnown RBP14.86□□□□□ -0.03
CD9-209ENST00000540891 ADA2Q9NZK5 511 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 UPB1Q9UBR1 384 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 EGFL7Q9UHF1 273 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 RIMS3Q9UJD0 308 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 A4GNTQ9UNA3 340 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 SNX13Q9Y5W8 968 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 OTOGQ6ZRI0 2925 aa14.86□□□□□ -0.03
CD9-209ENST00000540891 AKAP6Q13023 2319 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 PLPP3O14495 311 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 GSTA4O15217 222 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 UPK3AO75631 287 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 ATE1O95260 518 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 ZNF682O95780 498 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 CH25HO95992 272 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 PLAUP00749 431 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 SERPINA1P01009 418 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 UGT2B15P54855 530 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 SLC25A3Q00325 362 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 PMS2P3Q13401 168 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 KRT72Q14CN4 511 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 FXNQ16595 210 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 GKAP1Q5VSY0 366 aaPredicted RBP14.85□□□□□ -0.03
CD9-209ENST00000540891 SLC46A3Q7Z3Q1 461 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 WDFY1Q8IWB7 410 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 C10orf53Q8N6V4 93 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 LRRC17Q8N6Y2 441 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 POMGNT2Q8NAT1 580 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 FAM156AQ8NDB6 213 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 RBM15BQ8NDT2 890 aaKnown RBP14.85□□□□□ -0.03
CD9-209ENST00000540891 TMEM255BQ8WV15 326 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 LZICQ8WZA0 190 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 HSH2DQ96JZ2 352 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 PRRC1Q96M27 445 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 TMEM204Q9BSN7 226 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 CCM2LQ9NUG4 571 aaPredicted RBP14.85□□□□□ -0.03
CD9-209ENST00000540891 NPAP1Q9NZP6 1156 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 ADAM21Q9UKJ8 722 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 RCE1Q9Y256 329 aa14.85□□□□□ -0.03
CD9-209ENST00000540891 CIB4A0PJX0 185 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 J3KTA2 159 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 FFAR1O14842 300 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 THRBP10828 461 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 NQO1P15559 274 aaKnown RBP14.84□□□□□ -0.03
CD9-209ENST00000540891 MPGP29372 298 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 YAP1P46937 504 aaKnown RBP14.84□□□□□ -0.03
CD9-209ENST00000540891 PPA1Q15181 289 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 NCMAPQ5T1S8 102 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 GLYATQ6IB77 296 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 TSEN54Q7Z6J9 526 aaKnown RBP14.84□□□□□ -0.03
CD9-209ENST00000540891 P2RY8Q86VZ1 359 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 WDR31Q8NA23 367 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 OR5J2Q8NH18 312 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 PFN4Q8NHR9 129 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 FAM162AQ96A26 154 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms