RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 DGAT2L6Q6ZPD8 337 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 OR10G6Q8NH81 332 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 SYNPRQ8TBG9 265 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 FAM3CQ92520 227 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 PIGKQ92643 395 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 UTP23Q9BRU9 249 aaKnown RBP11.25□□□□□ -0.61
NPC1-202ENST00000540608 MGAT4CQ9UBM8 478 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 KIF25Q9UIL4 384 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 IDSB3KWA1 339 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 IMPA2O14732 288 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 GNB5O14775 395 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
NPC1-202ENST00000540608 PPM1BO75688 479 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 ZFPL1O95159 310 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 GIPP09681 153 aaPredicted RBP11.25□□□□□ -0.61
NPC1-202ENST00000540608 P2RX1P51575 399 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 IL10RAQ13651 578 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 ITPRIPL2Q3MIP1 535 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 TMEM196Q5HYL7 178 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 TMEM69Q5SWH9 247 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 ZNF684Q5T5D7 378 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 OR4N2Q8NGD1 307 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 OR6K6Q8NGW6 343 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 C1orf216Q8TAB5 229 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 RGP1Q92546 391 aaPredicted RBP11.25□□□□□ -0.61
NPC1-202ENST00000540608 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
NPC1-202ENST00000540608 SEC22CQ9BRL7 303 aa11.25□□□□□ -0.61
NPC1-202ENST00000540608 A0A087WUJ7 227 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ALDOBP05062 364 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 IL5P05113 134 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 S1PR1P21453 382 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 PRKACBP22694 351 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 MNDAP41218 407 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 MAGEB1P43366 347 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 MECP2P51608 486 aaKnown RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 CLDN12P56749 244 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 ZNHIT3Q15649 155 aaPredicted RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 ZNF141Q15928 474 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 NHLRC3Q5JS37 347 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 KANSL1Q7Z3B3 1105 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 GPAT4Q86UL3 456 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ZPLD1Q8TCW7 415 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 C15orf40Q8WUR7 153 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 TSACCQ96A04 125 aaPredicted RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 HAVCR1Q96D42 359 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 SFXN2Q96NB2 322 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 LMAN2LQ9H0V9 348 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 TAS2R10Q9NYW0 307 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ZNF337Q9Y3M9 751 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 A6NCN8 305 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ACOT7O00154 380 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 OR10H2O60403 315 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 GLCEO94923 617 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 CXCL2P19875 107 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 COL9A1P20849 921 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 ART1P52961 327 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 NFATC4Q14934 902 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 MEIOBQ8N635 442 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 THEM6Q8WUY1 208 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 NSMAFQ92636 917 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 RBPMSQ93062 196 aaKnown RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 MIB2Q96AX9 1013 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 GPN1Q9HCN4 374 aaPredicted RBP11.24□□□□□ -0.61
NPC1-202ENST00000540608 CD93Q9NPY3 652 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 HCN3Q9P1Z3 774 aa11.24□□□□□ -0.61
NPC1-202ENST00000540608 PSMD9O00233 223 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 CREBL2O60519 120 aaPredicted RBP11.23□□□□□ -0.61
NPC1-202ENST00000540608 OR2A4O95047 310 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 LDOC1O95751 146 aaPredicted RBP11.23□□□□□ -0.61
NPC1-202ENST00000540608 HRGP04196 525 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 CDK2P24941 298 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 LSSP48449 732 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 PSMA6P60900 246 aaKnown RBP11.23□□□□□ -0.61
NPC1-202ENST00000540608 RAP2BP61225 183 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 ERVK-25P63136 954 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
NPC1-202ENST00000540608 FAM53BQ14153 422 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 GPR18Q14330 331 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 LINC00303Q3SY05 128 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 ZNF626Q68DY1 528 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 KIAA1324Q6UXG2 1013 aaKnown RBP11.23□□□□□ -0.61
NPC1-202ENST00000540608 STAC2Q6ZMT1 411 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 C3P1Q6ZMU1 363 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 OR2A7Q96R45 310 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 TMPRSS13Q9BYE2 586 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 CA10Q9NS85 328 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 ZNF69Q9UC07 566 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 PCDHGA5Q9Y5G8 931 aa11.23□□□□□ -0.61
NPC1-202ENST00000540608 ETV7Q9Y603 341 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms