RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 DAG1Q14118 895 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 CHI3L2Q15782 390 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 RINLQ6ZS11 566 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 GLCCI1Q86VQ1 547 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 EPHX4Q8IUS5 362 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 ZCCHC24Q8N2G6 241 aaKnown RBP10.81□□□□□ -0.68
COPS7A-211ENST00000540408 MFSD8Q8NHS3 518 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 STK35Q8TDR2 534 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 ZFAND2BQ8WV99 257 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 CKAP2Q8WWK9 683 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 SLC25A36Q96CQ1 311 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 OR52E6Q96RD3 313 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 ZBTB18Q99592 522 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 MS4A5Q9H3V2 200 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 P2RX2Q9UBL9 471 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 RCE1Q9Y256 329 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 CMAHPQ9Y471 501 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
COPS7A-211ENST00000540408 FRS3O43559 492 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 AKAP8O43823 692 aaKnown RBP10.8□□□□□ -0.68
COPS7A-211ENST00000540408 IL2RGP31785 369 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 ETV4P43268 484 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 P2RY4P51582 365 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 NME5P56597 212 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 IL1RL1Q01638 556 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 NPRL3Q12980 569 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 RIN1Q13671 783 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 REP15Q6BDI9 236 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 ZNF836Q6ZNA1 936 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 LINGO2Q7L985 606 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 VRK2Q86Y07 508 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 PIK3C3Q8NEB9 887 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 PNPT1Q8TCS8 783 aaKnown RBP10.8□□□□□ -0.68
COPS7A-211ENST00000540408 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 OXGR1Q96P68 337 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 NUF2Q9BZD4 464 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 CRLF2Q9HC73 371 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 USP22Q9UPT9 525 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 NOX1Q9Y5S8 564 aa10.8□□□□□ -0.68
COPS7A-211ENST00000540408 IGHV2OR16-5A0A0B4J2B6 119 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 TMEM129A0AVI4 362 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 TMEM229AB2RXF0 380 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 RFXANKO14593 260 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 BIRC5O15392 142 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SPRY1O43609 319 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SYNGR3O43761 229 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 OR2T1O43869 369 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 TYROBPO43914 113 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 ANP32DO95626 131 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 GSNP06396 782 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 PNMTP11086 282 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 CFPP27918 469 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 CRATP43155 626 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 RPS5P46782 204 aaKnown RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SLC1A6P48664 564 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 EVX1P49640 407 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 UFM1P61960 85 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SNTB2Q13425 540 aaKnown RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 CCNIQ14094 377 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 CEACAM16Q2WEN9 425 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 COX20Q5RI15 118 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 RNF220Q5VTB9 566 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 KRT80Q6KB66 452 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SHQ1Q6PI26 577 aaKnown RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 KDM8Q8N371 416 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 TEX29Q8N6K0 151 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 ZNF418Q8TF45 676 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 ZMYND19Q96E35 227 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 PLA2G12AQ9BZM1 189 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 NELFAQ9H3P2 528 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 METTL17Q9H7H0 456 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 SEC61A2Q9H9S3 476 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 GPR35Q9HC97 309 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 THUMPD1Q9NXG2 353 aaKnown RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 RPS6KB2Q9UBS0 482 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 REV1Q9UBZ9 1251 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 ZNF443Q9Y2A4 671 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-211ENST00000540408 IFT52Q9Y366 437 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 GRIP1Q9Y3R0 1128 aa10.79□□□□□ -0.68
COPS7A-211ENST00000540408 A0A0G2JPF8 293 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 ZNF99A8MXY4 864 aaPredicted RBP10.78□□□□□ -0.68
COPS7A-211ENST00000540408 HNRNPCL2B2RXH8 293 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 HNRNPCL3B7ZW38 293 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 M0R233 179 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 AIM2O14862 343 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 HNRNPCL1O60812 293 aaKnown RBP10.78□□□□□ -0.68
COPS7A-211ENST00000540408 NPIPB7O75200 414 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 C1QCP02747 245 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 BCHEP06276 602 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 CELA3BP08861 270 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 HNRNPCL4P0DMR1 293 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 CREB1P16220 341 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 CDKN2CP42773 168 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 GPR6P46095 362 aaPredicted RBP10.78□□□□□ -0.68
COPS7A-211ENST00000540408 ACTG1P63261 375 aa10.78□□□□□ -0.68
COPS7A-211ENST00000540408 TRIP10Q15642 601 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms