RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TMEM38AQ9H6F2 299 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 PISDQ9UG56 409 aa8.02□□□□□ -1.13
DDB1-217ENST00000540166 MYLKQ15746 1914 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 NYNRINQ9P2P1 1898 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 LOC100509620A0A075B734 347 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 A0A1B0GTQ1 180 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 FAM183AA6NL82 134 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 KLK10O43240 276 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 ERAL1O75616 437 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 UBXN7O94888 489 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 MT-CO3P00414 261 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 SAGP10523 405 aaPredicted RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 MMP11P24347 488 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 GPR143P51810 404 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 WNT3P56703 355 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 RGS8P57771 180 aaPredicted RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 UBE2MP61081 183 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 RBM39Q14498 530 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 SPICQ8N5J4 248 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 DNAAF1Q8NEP3 725 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR2T33Q8NG76 320 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR5M1Q8NGP8 315 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR2A12Q8NGT7 310 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR10G6Q8NH81 332 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 DNASE2BQ8WZ79 361 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 ZNF354BQ96LW1 612 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 ESRP2Q9H6T0 727 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 TAS2R5Q9NYW4 299 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 FBXL3Q9UKT7 428 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 HS3ST3A1Q9Y663 406 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 TMEM218A2RU14 115 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 IGF2P01344 180 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 ATP1B1P05026 303 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 MPC1LP0DKB6 136 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 GTF2F2P13984 249 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 MGMTP16455 207 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 FPR3P25089 353 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 HSD3B2P26439 372 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 EPHA8P29322 1005 aaPredicted RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 GCGRP47871 477 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PRKXP51817 358 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PPP2CBP62714 309 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PPP2CAP67775 309 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 GGTA1PQ4G0N0 100 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 TMEM215Q68D42 235 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 UQCC3Q6UW78 93 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 GLDNQ6ZMI3 551 aaPredicted RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 RBM45Q8IUH3 476 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 PUSL1Q8N0Z8 303 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR8S1Q8NH09 359 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 GAL3ST3Q96A11 431 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 ADAT1Q9BUB4 502 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 TGIF2Q9GZN2 237 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 ZNF350Q9GZX5 532 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 EQTNQ9NQ60 294 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 DCAF16Q9NXF7 216 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 KCNK7Q9Y2U2 307 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PLXNA3P51805 1871 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 A0A0G2JN53 185 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 LY86O95711 162 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 C1SP09871 688 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 RAB5CP51148 216 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 CTSCP53634 463 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 YPEL5P62699 121 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 MAPK14Q16539 360 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PCGF3Q3KNV8 242 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 COMMD6Q7Z4G1 85 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 SKA3Q8IX90 412 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 OR52I2Q8NH67 350 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 SNIP1Q8TAD8 396 aaKnown RBP8.01□□□□□ -1.13
DDB1-217ENST00000540166 ABHD4Q8TB40 342 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 LGALS14Q8TCE9 139 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 KCNE4Q8WWG9 221 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 C3orf49Q96BT1 292 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 SEMA4CQ9C0C4 833 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 TCF7L1Q9HCS4 588 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
DDB1-217ENST00000540166 C5orf51A6NDU8 294 aa8□□□□□ -1.13
DDB1-217ENST00000540166 RIIAD1A6NNX1 92 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SNRPGP15A8MWD9 76 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ACOT7O00154 380 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ST8SIA5O15466 376 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ANXA2P07355 339 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 PTNP21246 168 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ST3GAL3Q11203 375 aa8□□□□□ -1.13
DDB1-217ENST00000540166 C21orf62-AS1Q17RA5 79 aa8□□□□□ -1.13
DDB1-217ENST00000540166 TCTN3Q6NUS6 607 aa8□□□□□ -1.13
DDB1-217ENST00000540166 FAAP20Q6NZ36 180 aa8□□□□□ -1.13
DDB1-217ENST00000540166 PARS2Q7L3T8 475 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 CBARPQ8N350 705 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 OR52B4Q8NGK2 314 aa8□□□□□ -1.13
DDB1-217ENST00000540166 DUSP19Q8WTR2 217 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SMIM4Q8WVI0 70 aa8□□□□□ -1.13
DDB1-217ENST00000540166 UBE2E3Q969T4 207 aa8□□□□□ -1.13
DDB1-217ENST00000540166 MS4A3Q96HJ5 214 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SLC35G5Q96KT7 338 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms