RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 RTN4RQ9BZR6 473 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 OR10A5Q9H207 317 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 KIF26BQ2KJY2 2108 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 CIB4A0PJX0 185 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 ARFIP1P53367 373 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 BDH1Q02338 343 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 KDM8Q8N371 416 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 C9orf62Q8N4C0 152 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 C19orf47Q8N9M1 422 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 LSM14AQ8ND56 463 aaKnown RBP12.48□□□□□ -0.41
BNIP3-202ENST00000540159 WDR76Q9H967 626 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 NANSQ9NR45 359 aa12.48□□□□□ -0.41
BNIP3-202ENST00000540159 SC5DO75845 299 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 IGHV4-34P06331 123 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 H2AFB2P0C5Z0 115 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 DCTDP32321 178 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 MAP3K8P41279 467 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 RGP1Q92546 391 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 TSLPQ969D9 159 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 ADAD1Q96M93 576 aaKnown RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 METTL17Q9H7H0 456 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 STMN3Q9NZ72 180 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 ZNF593O00488 134 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 SELENOPP49908 381 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 TOMM34Q15785 309 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 RPL13AP3Q6NVV1 102 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 Q6ZTK2 550 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 MS4A15Q8N5U1 240 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 KTI12Q96EK9 354 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 SYT4Q9H2B2 425 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 GHITMQ9H3K2 345 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 ZFP64Q9NPA5 681 aa12.47□□□□□ -0.41
BNIP3-202ENST00000540159 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.47□□□□□ -0.41
BNIP3-202ENST00000540159 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 C17orf105B2RV13 164 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ARPC1BO15143 372 aaKnown RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 RNH1P13489 461 aaKnown RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 TAS2R43P59537 309 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ACTC1P68032 377 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ACTA1P68133 377 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 TTLL10Q6ZVT0 673 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 OR2T35Q8NGX2 323 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 SYNPRQ8TBG9 265 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 C1QTNF6Q9BXI9 259 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ARL6IP5O75915 188 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 POU2F2P09086 479 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ANXA7P20073 488 aaKnown RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ENPP1P22413 925 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 FZD2Q14332 565 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 GRM7Q14831 915 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 DEFB133Q30KQ1 61 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 LIPNQ5VXI9 398 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 C16orf47Q6ZP98 133 aaPredicted RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 OR7G1Q8NGA0 311 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 UBL7Q96S82 380 aaPredicted RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 NXF5Q9H1B4 397 aaKnown RBP12.46□□□□□ -0.41
BNIP3-202ENST00000540159 C14orf105Q9NVL8 296 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 ING4Q9UNL4 249 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 FKBP7Q9Y680 259 aa12.46□□□□□ -0.41
BNIP3-202ENST00000540159 IGKV1D-42A0A075B6H8 117 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 UBL3O95164 117 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 UCHL1P09936 223 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 GRK6P43250 576 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.42
BNIP3-202ENST00000540159 THAP3Q8WTV1 239 aaPredicted RBP12.46□□□□□ -0.42
BNIP3-202ENST00000540159 PMEPA1Q969W9 287 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 AMELYQ99218 206 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 NRIP3Q9NQ35 241 aa12.46□□□□□ -0.42
BNIP3-202ENST00000540159 SDK2Q58EX2 2172 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 TRIOBPQ9H2D6 2365 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 FMO6PO60774 539 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 NOS1APO75052 506 aaPredicted RBP12.45□□□□□ -0.42
BNIP3-202ENST00000540159 ANXA3P12429 323 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 DIO1P49895 249 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 RIN1Q13671 783 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 GAS6Q14393 721 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 ALG10Q5BKT4 473 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 TPRA1Q86W33 373 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 PLCZ1Q86YW0 608 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms