RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 VRK1Q99986 396 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 SHARPINQ9H0F6 387 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 SLC6A13Q9NSD5 602 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 TMEM160Q9NX00 188 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 TMEM229AB2RXF0 380 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 FAM157CP0CG43 387 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 ETS2P15036 469 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 HNF1AP20823 631 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 PRKAR1BP31321 381 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 CAPZA2P47755 286 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBE3B-211ENST00000539843 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
UBE3B-211ENST00000539843 MAPK11Q15759 364 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 GTDC1Q4AE62 458 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 GCNT6Q5T4J0 391 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 FAM69AQ5T7M9 428 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-211ENST00000539843 SNX32Q86XE0 403 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 CCDC36Q8IYA8 594 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 C10orf105Q8TEF2 133 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 OXGR1Q96P68 337 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF607Q96SK3 696 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 RAB1BQ9H0U4 201 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 EVA1AQ9H8M9 152 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 TCF7L2Q9NQB0 619 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 CA10Q9NS85 328 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 KCNS2Q9ULS6 477 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 PCDHB14Q9Y5E9 798 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 USH1CQ9Y6N9 552 aa13.35□□□□□ -0.27
UBE3B-211ENST00000539843 SONP18583 2426 aaKnown RBP13.35□□□□□ -0.27
UBE3B-211ENST00000539843 ABCA1O95477 2261 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 A0A096LPE4 126 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 A0A1W2PPZ6 126 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 GPRIN2O60269 458 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 NPIPB7O75200 414 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 TGDSO95455 350 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 PRG2P13727 222 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 NQO1P15559 274 aaKnown RBP13.34□□□□□ -0.27
UBE3B-211ENST00000539843 NAAAQ02083 359 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 GGTLC2Q14390 218 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 IQCCQ4KMZ1 466 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 ALG10BQ5I7T1 473 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 VHLLQ6RSH7 139 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 LRRC8CQ8TDW0 803 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 GTF2H4Q92759 462 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 ANKRD27Q96NW4 1050 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 OR52B2Q96RD2 323 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 TMEM27Q9HBJ8 222 aa13.34□□□□□ -0.27
UBE3B-211ENST00000539843 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
UBE3B-211ENST00000539843 PLCE1Q9P212 2302 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 TRAV36DV7A0A075B6V5 113 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 LOC390937A0A1W2PQ73 354 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 UPK3AO75631 287 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 SERPINB7O75635 380 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 BMP2P12643 396 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 APEHP13798 732 aaKnown RBP13.33□□□□□ -0.28
UBE3B-211ENST00000539843 SLC6A2P23975 617 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 ARR3P36575 388 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 P2RY4P51582 365 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 FAM91A1Q658Y4 838 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 FAM166AQ6J272 317 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 REEP3Q6NUK4 255 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 SLC2A7Q6PXP3 512 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 RANBP3LQ86VV4 465 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-211ENST00000539843 EPHX4Q8IUS5 362 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 UEVLDQ8IX04 471 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 IL17RDQ8NFM7 739 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.28
UBE3B-211ENST00000539843 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-211ENST00000539843 MAL2Q969L2 176 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 SLC47A1Q96FL8 570 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 C7orf26Q96N11 449 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 ASPNQ9BXN1 380 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
UBE3B-211ENST00000539843 USP22Q9UPT9 525 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 CORINQ9Y5Q5 1042 aa13.33□□□□□ -0.28
UBE3B-211ENST00000539843 ZANQ9Y493 2812 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 FTCDNL1E5RQL4 147 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 M0R082 166 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 NR5A2O00482 541 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 LMX1BO60663 402 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 NUDT7P0C024 238 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 OR4A8P0C604 315 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 CECR9P0C854 216 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF16P17020 682 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 PPOXP50336 477 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 RGS8P57771 180 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 HOXC5Q00444 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms