RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TRIB1Q96RU8 372 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 SRXN1Q9BYN0 137 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 CALHM2Q9HA72 323 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 NTN4Q9HB63 628 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 PDP1Q9P0J1 537 aaPredicted RBP13.82□□□□□ -0.2
DDB1-216ENST00000539739 ZNF229Q9UJW7 825 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 ZNF175Q9Y473 711 aa13.82□□□□□ -0.2
DDB1-216ENST00000539739 FUOMA2VDF0 154 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 FTCDNL1E5RQL4 147 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 ZNF23P17027 643 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 ACVR2AP27037 513 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 GRPRP30550 384 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 LTBQ06643 244 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 PON3Q15166 354 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 ZNF239Q16600 458 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 ANKDD1AQ495B1 522 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 ACSF3Q4G176 576 aaPredicted RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 SHQ1Q6PI26 577 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 PAQR6Q6TCH4 344 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 TMPRSS11FQ6ZWK6 438 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 P4HA3Q7Z4N8 544 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 DOLPP1Q86YN1 238 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 ZDHHC13Q8IUH4 622 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 SVOPLQ8N434 492 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 ICA1LQ8NDH6 482 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 OR10G2Q8NGC3 310 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 GNPDA2Q8TDQ7 276 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 FAM46AQ96IP4 442 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
DDB1-216ENST00000539739 RBM38Q9H0Z9 239 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 RALYQ9UKM9 306 aaKnown RBP13.81□□□□□ -0.2
DDB1-216ENST00000539739 NBASA2RRP1 2371 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 TRGV8A0A0C4DH27 118 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 ARRDC5A6NEK1 342 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 SLC22A20A6NK97 555 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 EFCAB9A8MZ26 197 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 LRRN3E7EW58 273 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 G3V2T6 193 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 TRMUO75648 421 aaKnown RBP13.8□□□□□ -0.2
DDB1-216ENST00000539739 AKR7A3O95154 331 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 FCGR2AP12318 317 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 GPR4P46093 362 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 OMPP47874 163 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 LAPTM4AQ15012 233 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 NSUN5P2Q63ZY6 315 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 GTF2IRD2BQ6EKJ0 949 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 C1orf94Q6P1W5 598 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
DDB1-216ENST00000539739 FCRLAQ7L513 359 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 SLC46A3Q7Z3Q1 461 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 ZER1Q7Z7L7 766 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 ADGRE4PQ86SQ3 457 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 GTF2IRD2Q86UP8 949 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 SLC43A2Q8N370 569 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 OR9Q2Q8NGE9 314 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 OR5J2Q8NH18 312 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 LIPHQ8WWY8 451 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 NMD3Q96D46 503 aaKnown RBP13.8□□□□□ -0.2
DDB1-216ENST00000539739 UCN2Q96RP3 112 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 SH3BGRL2Q9UJC5 107 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 TINAGQ9UJW2 476 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 MGAT4BQ9UQ53 548 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 OSGIN2Q9Y236 505 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 B3GALT5Q9Y2C3 310 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 CHD6Q8TD26 2715 aa13.8□□□□□ -0.2
DDB1-216ENST00000539739 CD8B2A6NJW9 211 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 FAM25EA8MYX2 175 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 M0R082 166 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 FZD7O75084 574 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 OR6A2O95222 327 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ASAH2BP0C7U1 165 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ANXA8P13928 327 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ANPEPP15144 967 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 MAKP20794 623 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 SLC9A3P48764 834 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 CHN2P52757 468 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 H3F3AP84243 136 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 PMS2P3Q13401 168 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
DDB1-216ENST00000539739 FAM209AQ5JX71 171 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 OTUD3Q5T2D3 398 aaPredicted RBP13.79□□□□□ -0.2
DDB1-216ENST00000539739 TMEM225Q6GV28 225 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 PGBD2Q6P3X8 592 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 RPTNQ6XPR3 784 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 MCEMP1Q8IX19 187 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 TMEM99Q8N816 258 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 AQP11Q8NBQ7 271 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 FNDC9Q8TBE3 224 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 WNT2BQ93097 391 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 BORCS5Q969J3 196 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
DDB1-216ENST00000539739 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 MRPL39Q9NYK5 338 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms