RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TAGLN3Q9UI15 199 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
USB1-203ENST00000539737 M0QX08 132 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 SULT2B1O00204 365 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 FRS3O43559 492 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 IFNA14P01570 189 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 OPN1SWP03999 348 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 FESP07332 822 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 PRG2P13727 222 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 NUDT6P53370 316 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 P2RY6Q15077 328 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 ETFDHQ16134 617 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 RANBP3LQ86VV4 465 aaPredicted RBP13.14□□□□□ -0.31
USB1-203ENST00000539737 MICU2Q8IYU8 434 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
USB1-203ENST00000539737 SMYD1Q8NB12 490 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 RHNO1Q9BSD3 238 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 C1QTNF6Q9BXI9 259 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 ADAM19Q9H013 955 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 ALG2Q9H553 416 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 SPAG4Q9NPE6 437 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 CMTM6Q9NX76 183 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 RPS6KB2Q9UBS0 482 aa13.14□□□□□ -0.31
USB1-203ENST00000539737 ELOVL7A1L3X0 281 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 CCT8L1PA6NM43 557 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 DNPH1O43598 174 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 TPST1O60507 370 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 TMCC2O75069 709 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 IGHV1-2P23083 117 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 IGFBP5P24593 272 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 CXCR1P25024 350 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 ZNF83P51522 516 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 MNAT1P51948 309 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
USB1-203ENST00000539737 PSME3P61289 254 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 LIPEQ05469 1076 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 PPA1Q15181 289 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 SSX8Q7RTT4 187 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 ADGRG3Q86Y34 549 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 SLC15A3Q8IY34 581 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 OR10H5Q8NGA6 315 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 HSD17B8Q92506 261 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 TAMM41Q96BW9 452 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 TNFRSF13CQ96RJ3 184 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 BEX2Q9BXY8 128 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 POTEKPQ9BYX7 375 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 C12orf10Q9HB07 376 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 ABCD2Q9UBJ2 740 aa13.13□□□□□ -0.31
USB1-203ENST00000539737 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 NME4O00746 187 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 FMO6PO60774 539 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 PMS2P2O95744 297 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 CCNA2P20248 432 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 DIO1P49895 249 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 HOXC5Q00444 222 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 ITGADQ13349 1161 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 NRF1Q16656 503 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
USB1-203ENST00000539737 TMPPEQ6ZT21 453 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 LSMEM1Q8N8F7 131 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 OR52N5Q8NH56 324 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 DNAJA4Q8WW22 397 aaPredicted RBP13.12□□□□□ -0.31
USB1-203ENST00000539737 PROX1Q92786 737 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 ARL8BQ9NVJ2 186 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 SELENONQ9NZV5 590 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 SLC9A8Q9Y2E8 581 aa13.12□□□□□ -0.31
USB1-203ENST00000539737 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
USB1-203ENST00000539737 A8MVM7 634 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 GPR171O14626 319 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 GSTA4O15217 222 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 CYTIPO60759 359 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 RAD51DO75771 328 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 LGI1O95970 557 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 PNMTP11086 282 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 CD247P20963 164 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 HTR2AP28223 471 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 DUSP7Q16829 419 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 SWT1Q5T5J6 900 aaKnown RBP13.11□□□□□ -0.31
USB1-203ENST00000539737 CLEC2AQ6UVW9 174 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 C6orf89Q6UWU4 347 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms