RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZNF264O43296 627 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 UMODP07911 640 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 NGFRP08138 427 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PRKAR1AP10644 381 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 CD79BP40259 229 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 STAT5AP42229 794 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 CCR4P51679 360 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PNLIPRP2P54317 469 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 SLC26A5P58743 744 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 SKP2Q13309 424 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 ULK3Q6PHR2 472 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 SHFQ7M4L6 423 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 MARCH3Q86UD3 253 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 TEX47Q8TBZ9 253 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF524Q96C55 264 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 ARHGAP9Q9BRR9 750 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 STRADBQ9C0K7 418 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PARD6AQ9NPB6 346 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 IL20Q9NYY1 176 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 RPS6KB2Q9UBS0 482 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 C19orf25Q9UFG5 118 aaPredicted RBP15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PISDQ9UG56 409 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 NXT1Q9UKK6 140 aaKnown RBP15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 MED31Q9Y3C7 131 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PCDHGB7Q9Y5F8 929 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 PRR33A8MZF0 331 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 GMFGO60234 142 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 FAM157BP0CG42 384 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 LIMS3P0CW19 117 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 LIMS4P0CW20 117 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 SLC27A4Q6P1M0 643 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 LINC00114Q6XXX2 140 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 BPIFA2Q96DR5 249 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF426Q9BUY5 554 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 NARFLQ9H6Q4 476 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 NIPAL2Q9H841 368 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 DIABLOQ9NR28 239 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 NLKQ9UBE8 527 aa15.56■□□□□ 0.08
PCDHB17P-201ENST00000539533 FAM240BA0A1B0GVZ2 78 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 TRDV1A0A1B0GX56 115 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 C9J4A7 227 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 LYRM1O43325 122 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 STK17BO94768 372 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 C1QBP02746 253 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 NUBP1P53384 320 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 E2F1Q01094 437 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 TNK1Q13470 666 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 IL18Q14116 193 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 SLC30A6Q6NXT4 461 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 METAP1DQ6UB28 335 aaPredicted RBP15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF620Q6ZNG0 422 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 IDO2Q6ZQW0 420 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF767PQ75MW2 155 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 OR5M3Q8NGP4 307 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 UPRTQ96BW1 309 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 DCLRE1CQ96SD1 692 aaKnown RBP15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ATF6BQ99941 703 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 KRCC1Q9NPI7 259 aaPredicted RBP15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 NPFFR2Q9Y5X5 522 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 OTOGLQ3ZCN5 2332 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 A0A1W2PNU3 283 aaPredicted RBP15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 CDK2AP1O14519 115 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 EVX1P49640 407 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 NRG3P56975 720 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ESCO2Q56NI9 601 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 DHRS13Q6UX07 377 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF440Q8IYI8 595 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF485Q8NCK3 441 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 NUBPLQ8TB37 319 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 OIT3Q8WWZ8 545 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 HS6ST2Q96MM7 605 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 CDC6Q99741 560 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 TMEM43Q9BTV4 400 aa15.55■□□□□ 0.08
PCDHB17P-201ENST00000539533 SHOXO15266 292 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 NCR1O76036 304 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 LALBAP00709 142 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 LCN1P31025 176 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 AP2S1P53680 142 aaPredicted RBP15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 CLDN20P56880 219 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 ZNF117Q03924 483 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 CDCP2Q5VXM1 449 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 MRGPREQ86SM8 312 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 GLRX5Q86SX6 157 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 LHFPL3Q86UP9 236 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 OR4Q3Q8NH05 313 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 C3orf49Q96BT1 292 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 SAMD8Q96LT4 415 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 ENKD1Q9H0I2 346 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 ING3Q9NXR8 418 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 EP300Q09472 2414 aaPredicted RBP15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 UNC119BA6NIH7 251 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 LEUTXA8MZ59 168 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 KDM4EB2RXH2 506 aaPredicted RBP15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 ALG1L2C9J202 215 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 CH25HO95992 272 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 JMJD7P0C870 316 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 PTBP1P26599 531 aaKnown RBP eCLIP15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 FXYD6P3P58550 94 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 TCF15Q12870 199 aa15.54■□□□□ 0.08
PCDHB17P-201ENST00000539533 PCOLCEQ15113 449 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms