RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF587Q96SQ5 575 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CACNG6Q9BXT2 260 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TRIM33Q9UPN9 1127 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 NDUFAF1Q9Y375 327 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FN1P02751 2386 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SERPINB7O75635 380 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SASH3O75995 380 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 WNT11O96014 354 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZNF43P17038 809 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 GRPRP30550 384 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OR1Q1Q15612 314 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CYP51A1Q16850 503 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FAM69AQ5T7M9 428 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ULK3Q6PHR2 472 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 PTOV1Q86YD1 416 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FBXL14Q8N1E6 418 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 MUC15Q8N387 334 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OR1K1Q8NGR3 316 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OXGR1Q96P68 337 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CGREF1Q99674 301 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 GRIP2Q9C0E4 1043 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TMEM27Q9HBJ8 222 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CBLN4Q9NTU7 201 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SELENONQ9NZV5 590 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 B3GAT1Q9P2W7 334 aa16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TESQ9UGI8 421 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-212ENST00000539372 NSD1Q96L73 2696 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A096LPE4 126 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A1W2PPZ6 126 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ATP6V1G2-DDX39BF2Z307 99 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 AIM2O14862 343 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OR2T1O43869 369 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TPST2O60704 377 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 MFN2O95140 757 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OPN1SWP03999 348 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TUBA1BP68363 451 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TUBA4AP68366 448 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C1DQ13901 141 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 NFYCQ13952 458 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TBRG1Q3YBR2 411 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FAM91A1Q658Y4 838 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C11orf71Q6IPW1 123 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C5orf46Q6UWT4 87 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TUBA1AQ71U36 451 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DPP10Q8N608 796 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C11orf65Q8NCR3 313 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 BHLHE22Q8NFJ8 381 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 HTRA1Q92743 480 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SLC47A1Q96FL8 570 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ANKRD27Q96NW4 1050 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 REG4Q9BYZ8 158 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FKRPQ9H9S5 495 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 MOKQ9UQ07 419 aa16.66■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CSPG4Q6UVK1 2322 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A087WUJ7 227 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A0B4J2E0 115 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A1B0GX12 115 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 OR6C65A6NJZ3 312 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 INAFM1C9JVW0 142 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 M0R3H8 397 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SSX4O60224 188 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FZD7O75084 574 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ROR2Q01974 943 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 HMBOX1Q6NT76 420 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 H1FNTQ75WM6 255 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RANBP3LQ86VV4 465 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 BCL2L2Q92843 193 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ADAD1Q96M93 576 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 LINC00470Q9BZP3 86 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 BARX1Q9HBU1 254 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZANQ9Y493 2812 aa16.65■□□□□ 0.26
TNFRSF1A-212ENST00000539372 M0QX08 132 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 SLC43A1O75387 559 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 ZNF432O94892 652 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 NQO1P15559 274 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 CDH12P55289 794 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 PCBP3P57721 371 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 UBE2NP61088 152 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 SF3A3Q12874 501 aaKnown RBP eCLIP16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 ZNF544Q6NX49 715 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 NET1Q7Z628 596 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 BOD1Q96IK1 185 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 SIKE1Q9BRV8 207 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 TMEM120AQ9BXJ8 343 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 OBP2BQ9NPH6 170 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 RCE1Q9Y256 329 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 TLN2Q9Y4G6 2542 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 PLCE1Q9P212 2302 aa16.64■□□□□ 0.25
TNFRSF1A-212ENST00000539372 IGHV1-18A0A0C4DH31 117 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 MS4A18H0YCH9 400 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 HPRP00739 348 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 BGLAPP02818 100 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 NUDT6P53370 316 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 PPP2R2BQ00005 443 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 KRTAP1-1Q07627 177 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 RBBP4Q09028 425 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 NRF1Q16656 503 aa16.63■□□□□ 0.25
TNFRSF1A-212ENST00000539372 DUSP7Q16829 419 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms