RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 RPS11P62280 158 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDCA3-207ENST00000538862 HSF2Q03933 536 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 LYPD4Q6UWN0 246 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 ARL14Q8N4G2 192 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 ARHGEF39Q8N4T4 335 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 OR9A4Q8NGU2 314 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 SLC37A2Q8TED4 501 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 SNX33Q8WV41 574 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 DDOQ99489 341 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 ORAI3Q9BRQ5 295 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 SEMA6CQ9H3T2 930 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 LRRN3Q9H3W5 708 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 EMC7Q9NPA0 242 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 NRIP3Q9NQ35 241 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 NUDT15Q9NV35 164 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 ING4Q9UNL4 249 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 OR5K3A6NET4 321 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF879B4DU55 563 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 MCIDASD6RGH6 385 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SNRPBP14678 240 aaKnown RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 IGLV3-21P80748 117 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 IL10RAQ13651 578 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 FCN2Q15485 313 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 FAM205BPQ63HN1 556 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 NPEPL1Q8NDH3 523 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RCBTB1Q8NDN9 531 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 ADAMTS14Q8WXS8 1223 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 HSD17B8Q92506 261 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 PCED1AQ9H1Q7 454 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 Q9N2J8 555 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 BRD7Q9NPI1 651 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SPEGQ15772 3267 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 TRBV2A0A0J9YWF9 115 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1B0GVT2 93 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 FABP7O15540 132 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF749O43361 778 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 AKR7A2O43488 359 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 CTNSO60931 367 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RNH1P13489 461 aaKnown RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RPL4P36578 427 aaKnown RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 HTR2BP41595 481 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SKP1P63208 163 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 STX4Q12846 297 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 DYRK1AQ13627 763 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SLC22A10Q63ZE4 541 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF782Q6ZMW2 699 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RABEPKQ7Z6M1 372 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SIAH3Q8IW03 269 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 OR13H1Q8NG92 308 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 OR7G1Q8NGA0 311 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 RPS4Y2Q8TD47 263 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 SNAPC3Q92966 411 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 CCNL2Q96S94 520 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 NMNAT2Q9BZQ4 307 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 FAM60AQ9NP50 221 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 GNG8Q9UK08 70 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 POMT2Q9UKY4 750 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF337Q9Y3M9 751 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 HSPB11Q9Y547 144 aa13.29□□□□□ -0.28
CDCA3-207ENST00000538862 PCNX2A6NKB5 2137 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 TRAV6A0A075B6T7 132 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 TEX13CA0A0J9YWL9 993 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 C10orf142B7Z368 130 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 HCRTR1O43613 425 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 FOXS1O43638 330 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 PRAMEF2O60811 474 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 CD3GP09693 182 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 SDHBP21912 280 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 EDNRAP25101 427 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 CD27P26842 260 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 NAA10P41227 235 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-207ENST00000538862 PRPS1P60891 318 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 DGCR2P98153 550 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 C19orf57Q0VDD7 668 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 FAM53BQ14153 422 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 UBE2NLQ5JXB2 153 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 NPSR1Q6W5P4 371 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF595Q8IYB9 648 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 C9orf62Q8N4C0 152 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 OR4D9Q8NGE8 314 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF578Q96N58 590 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-207ENST00000538862 GPX7Q96SL4 187 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-207ENST00000538862 CACNG6Q9BXT2 260 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 SLC19A3Q9BZV2 496 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 OR51J1Q9H342 316 aa13.28□□□□□ -0.28
CDCA3-207ENST00000538862 PCDHGA9Q9Y5G4 932 aaKnown RBP13.28□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1W2PPC4 97 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1W2PPK0 400 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms