RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NPIPA1Q9UND3 350 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 A0A0J9YW62 118 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 H0YC42 278 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 SLC16A6O15403 523 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 AKR7A3O95154 331 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 PMS2P2O95744 297 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ADORA3P0DMS8 318 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 AHCYP23526 432 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 EIF1AXP47813 144 aaKnown RBP12.69□□□□□ -0.38
CD4-208ENST00000538827 DIO1P49895 249 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 CDC42P60953 191 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
CD4-208ENST00000538827 CSNK2A1P68400 391 aaPredicted RBP12.69□□□□□ -0.38
CD4-208ENST00000538827 SLC35A1P78382 337 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 RPL18Q07020 188 aaKnown RBP12.69□□□□□ -0.38
CD4-208ENST00000538827 MED21Q13503 144 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 C3AR1Q16581 482 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 SGCBQ16585 318 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ALG10Q5BKT4 473 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 CMPK2Q5EBM0 449 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 CASP12Q6UXS9 341 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 GGNQ86UU5 652 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 OR2T33Q8NG76 320 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 OR2V1Q8NHB1 315 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 NEIL3Q8TAT5 605 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 PNPLA2Q96AD5 504 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ZHX1-C8orf76Q96EF9 292 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 PLEKHA8Q96JA3 519 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 MUS81Q96NY9 551 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 TEX12Q9BXU0 123 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 POLDIP3Q9BY77 421 aaKnown RBP12.69□□□□□ -0.38
CD4-208ENST00000538827 ANKRD60Q9BZ19 345 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 PRRG3Q9BZD7 231 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ACKR4Q9NPB9 350 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 TVP23BQ9NYZ1 205 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 SPRR3Q9UBC9 169 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 TNFRSF10DQ9UBN6 386 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 CORINQ9Y5Q5 1042 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ZNF407Q9C0G0 2248 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 ABCA12Q86UK0 2595 aa12.69□□□□□ -0.38
CD4-208ENST00000538827 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 RNF13O43567 381 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 CXCL13O43927 109 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 PTP4A3O75365 173 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 ACTL6AO96019 429 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 PLGP00747 810 aaPredicted RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 CRYABP02511 175 aaKnown RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 F13BP05160 661 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 UQCRC1P31930 480 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 GRK5P34947 590 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 LHX2P50458 406 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 SUCLG1P53597 346 aaKnown RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 CTXN1P60606 82 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 PRPS1P60891 318 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 ERVK-25P63136 954 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 IL18R1Q13478 541 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 C12orf73Q69YU5 71 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 TMPPEQ6ZT21 453 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 ESPNLQ6ZVH7 1005 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 OR10D3Q8NH80 312 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 SLC38A2Q96QD8 506 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 SRXN1Q9BYN0 137 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 ENKD1Q9H0I2 346 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 INIPQ9NRY2 104 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 NDRG4Q9ULP0 352 aaKnown RBP12.68□□□□□ -0.38
CD4-208ENST00000538827 LRCH1Q9Y2L9 728 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 LRRC42Q9Y546 428 aa12.68□□□□□ -0.38
CD4-208ENST00000538827 CLEC18AA5D8T8 446 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 PLPP3O14495 311 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 DENRO43583 198 aaKnown RBP12.67□□□□□ -0.38
CD4-208ENST00000538827 ZNF708P17019 499 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 KLK2P20151 261 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 MYF6P23409 242 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 NOS3P29474 1203 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 CLDN18P56856 261 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 RPS3AP61247 264 aaKnown RBP12.67□□□□□ -0.38
CD4-208ENST00000538827 HSF1Q00613 529 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 PUDPQ08623 228 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 FHL1Q13642 323 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 PDK3Q15120 406 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 SNAPC1Q16533 368 aa12.67□□□□□ -0.38
CD4-208ENST00000538827 CTU2Q2VPK5 515 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms