RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HDHD5Q9BXW7 423 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 ZNF700Q9H0M5 742 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 QPCTLQ9NXS2 382 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 KLRF1Q9NZS2 232 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 MOKQ9UQ07 419 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 POLHQ9Y253 713 aa13.42□□□□□ -0.26
ATL3-203ENST00000538786 CTDSP2O14595 271 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 PLPP2O43688 288 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 MSX1P28360 303 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 NAA10P41227 235 aaPredicted RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 OR12D2P58182 307 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 ACTA2P62736 377 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 ACTG2P63267 376 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 KRR1Q13601 381 aaKnown RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 LINC01590Q5TEZ4 76 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 DCDC5Q6ZRR9 648 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SSX6Q7RTT6 188 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SYS1Q8N2H4 156 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 PARP16Q8N5Y8 322 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 EXD3Q8N9H8 876 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 GALNT6Q8NCL4 622 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 OR6K6Q8NGW6 343 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 OR5J2Q8NH18 312 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SLC25A36Q96CQ1 311 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 RPRD1BQ9NQG5 326 aaKnown RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 SDHAF3Q9NRP4 125 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 B4DXG7 233 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 E9PI62 339 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 OR2T1O43869 369 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 RGS9O75916 674 aaPredicted RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 AHSA1O95433 338 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 CLEC2LP0C7M8 214 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 APOBEC1P41238 236 aaKnown RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 HCCSP53701 268 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 IFITM3Q01628 133 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 HNRNPA0Q13151 305 aaKnown RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 TRAM1Q15629 374 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 EXT1Q16394 746 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 NTRK2Q16620 822 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 MESTQ5EB52 335 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SPANXN2Q5MJ10 180 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 DCAF12Q5T6F0 453 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 OR6S1Q8NH40 331 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 SPACA9Q96E40 222 aaPredicted RBP13.41□□□□□ -0.26
ATL3-203ENST00000538786 IMMP1LQ96LU5 166 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 ALG12Q9BV10 488 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 KCNN2Q9H2S1 579 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 MED11Q9P086 117 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 PPP4R1LQ9P1A2 415 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 B3GALT1Q9Y5Z6 326 aa13.41□□□□□ -0.26
ATL3-203ENST00000538786 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 IGLV3-32A0A0A0MS00 114 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 C4orf47A7E2U8 309 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 ETV2O00321 342 aaPredicted RBP13.4□□□□□ -0.26
ATL3-203ENST00000538786 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
ATL3-203ENST00000538786 DKK1O94907 266 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 COX6A1P12074 109 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 F8A1P23610 371 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 PTGDSP41222 190 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 CDONQ4KMG0 1287 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 BICRALQ6AI39 1079 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 TMEM91Q6ZNR0 172 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 CENPSQ8N2Z9 138 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 RFLNBQ8N5W9 214 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 OR10G3Q8NGC4 313 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 NEIL3Q8TAT5 605 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 MRPL48Q96GC5 212 aaKnown RBP13.4□□□□□ -0.26
ATL3-203ENST00000538786 CEP19Q96LK0 163 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 OR11A1Q9GZK7 315 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 METTL7AQ9H8H3 244 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 PLEKHB1Q9UF11 243 aaPredicted RBP13.4□□□□□ -0.26
ATL3-203ENST00000538786 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
ATL3-203ENST00000538786 LOXL2Q9Y4K0 774 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 HS3ST3B1Q9Y662 390 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 A0A0C4DFX4 3053 aa13.4□□□□□ -0.26
ATL3-203ENST00000538786 SELENOFO60613 162 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 RENP00797 406 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 GRPRP30550 384 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 PYCR1P32322 319 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 TNFSF8P32971 234 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 FOLR3P41439 243 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 TGM4P49221 684 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 E2F1Q01094 437 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 HSF2Q03933 536 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 ATP1A4Q13733 1029 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 ARL9Q6T311 187 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 ARSKQ6UWY0 536 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 OR2T4Q8NH00 348 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 M1APQ8TC57 530 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 DNAJA3Q96EY1 480 aa13.39□□□□□ -0.27
ATL3-203ENST00000538786 SLC30A2Q9BRI3 323 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms