RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 FAM172BPA6NC97 362 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 LMO7DNF2Z398 122 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 MBTPS2O43462 519 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 SLC43A1O75387 559 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 SLC6A1P30531 599 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 EFNA3P52797 238 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 CDK10Q15131 360 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 PYHIN1Q6K0P9 492 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 FAM122BQ7Z309 247 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 TDHQ8IZJ6 230 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 LCORQ96JN0 433 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-204ENST00000538492 GALNT9Q9HCQ5 603 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 SRA1Q9HD15 236 aaKnown RBP22.68■■□□□ 1.22
RAB40C-204ENST00000538492 ACOD1A6NK06 481 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 CD14P08571 375 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 TACR3P29371 465 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 NANOS3P60323 173 aaKnown RBP22.68■■□□□ 1.22
RAB40C-204ENST00000538492 ZP2Q05996 745 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 TDGQ13569 410 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 ISXQ2M1V0 245 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 HSD17B12Q53GQ0 312 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 LPAR4Q99677 370 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 TMEM246Q9BRR3 403 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 NOX4Q9NPH5 578 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 RXFP3Q9NSD7 469 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 EPHA6Q9UF33 1036 aa22.68■■□□□ 1.22
RAB40C-204ENST00000538492 RPP14O95059 124 aaKnown RBP22.67■■□□□ 1.22
RAB40C-204ENST00000538492 CD3GP09693 182 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 CSNK1EP49674 416 aaKnown RBP22.67■■□□□ 1.22
RAB40C-204ENST00000538492 ARL4DP49703 201 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 HNRNPKP61978 463 aaKnown RBP eCLIP22.67■■□□□ 1.22
RAB40C-204ENST00000538492 CCDC58Q4VC31 144 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 VWA2Q5GFL6 755 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 SLITRK4Q8IW52 837 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 HSD17B8Q92506 261 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 SLC25A18Q9H1K4 315 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 MCUBQ9NWR8 336 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 DCTN6O00399 190 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 DDAH2O95865 285 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 YES1P07947 543 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 LRRC75AQ8NAA5 344 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF721Q8TF20 911 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 DERL3Q96Q80 235 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 TEKT2Q9UIF3 430 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 CACNG2Q9Y698 323 aa22.67■■□□□ 1.22
RAB40C-204ENST00000538492 H3BMH7 237 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 GATBO75879 557 aaKnown RBP22.66■■□□□ 1.22
RAB40C-204ENST00000538492 ASAH2BP0C7U1 165 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 RPL18Q07020 188 aaKnown RBP22.66■■□□□ 1.22
RAB40C-204ENST00000538492 ADIPOR1Q96A54 375 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 CREB3L1Q96BA8 519 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 NUDT9Q9BW91 350 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 TMEM72A0PK05 275 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 HCRTR2O43614 444 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 IGKV3-11P04433 115 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 MTFR2Q6P444 385 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 ASCC1Q8N9N2 400 aaKnown RBP22.66■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF671Q8TAW3 534 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 EXOSC3Q9NQT5 275 aaKnown RBP22.66■■□□□ 1.22
RAB40C-204ENST00000538492 KLHDC2Q9Y2U9 406 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 MMACHCQ9Y4U1 282 aa22.66■■□□□ 1.22
RAB40C-204ENST00000538492 FRG2CA6NGY1 282 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 PIN1P1O15428 100 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 ZFPL1O95159 310 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 MYF5P13349 255 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 SRMP19623 302 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 SDHAP31040 664 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 BTCP35070 178 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 DGCR2P98153 550 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF117Q03924 483 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 BIKQ13323 160 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 IL10RAQ13651 578 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 TOMM34Q15785 309 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-204ENST00000538492 PLA1AQ53H76 456 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 IZUMO1Q8IYV9 350 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 OR1L3Q8NH93 324 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 TAAR8Q969N4 342 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 ELF4Q99607 663 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-204ENST00000538492 PHF7Q9BWX1 381 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-204ENST00000538492 FOXQ1Q9C009 403 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 ABRACLQ9P1F3 81 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 GRHPRQ9UBQ7 328 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 IGKV3D-11A0A0A0MRZ8 115 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 OR8G3PP0DMU2 310 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 NTRK2Q16620 822 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 SLC36A2Q495M3 483 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 NANOGNBQ7Z5D8 188 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 LGALS14Q8TCE9 139 aa22.65■■□□□ 1.22
RAB40C-204ENST00000538492 MRPL48Q96GC5 212 aaKnown RBP22.65■■□□□ 1.22
RAB40C-204ENST00000538492 TRAV6A0A075B6T7 132 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 TVP23AA6NH52 213 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 KHNYNO15037 678 aaKnown RBP22.64■■□□□ 1.22
RAB40C-204ENST00000538492 ITPKBP27987 946 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 HSD11B2P80365 405 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 C1orf189Q5VU69 101 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 OGFOD3Q6PK18 319 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 OVCH1Q7RTY7 1134 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 MARCH3Q86UD3 253 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF433Q8N7K0 673 aaPredicted RBP22.64■■□□□ 1.22
RAB40C-204ENST00000538492 LIPHQ8WWY8 451 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms