RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 POTEKPQ9BYX7 375 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PLA2G12AQ9BZM1 189 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SLITRK2Q9H156 845 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 XKR8Q9H6D3 395 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CXorf36Q9H7Y0 433 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 APMAPQ9HDC9 416 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 NMRK2Q9NPI5 230 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 UQCC1Q9NVA1 299 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 RBPJLQ9UBG7 517 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 DPP7Q9UHL4 492 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ST6GALNAC2Q9UJ37 374 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SLC13A4Q9UKG4 626 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PCDHB10Q9UN67 800 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FOXJ3Q9UPW0 622 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 YBX2Q9Y2T7 364 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 KPTNQ9Y664 436 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 OBSL1O75147 1896 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TRBV6-7A0A0A0MS04 114 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 GXYLT2A0PJZ3 443 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 FITM1A5D6W6 292 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 GLTPD2A6NH11 291 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR5H14A6NHG9 310 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 IFITM5A6NNB3 132 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 HSPB2A8KAH6 182 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 E7EQ34 232 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 AP4M1O00189 453 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 MFNGO00587 321 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 P2RX6O15547 441 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 XRCC3O43542 346 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 B3GAT3O94766 335 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 GLSO94925 669 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 PCDH8O95206 1070 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ETHE1O95571 254 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 AGR2O95994 175 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SBK2P0C263 348 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR2T7P0C7T2 308 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 NR2F1P10589 423 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SFTPCP11686 197 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 DPEP1P16444 411 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 BMP7P18075 431 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 MPZP25189 248 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 NDUFS1P28331 727 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 CD1CP29017 333 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 CSF2RBP32927 897 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TRHRP34981 398 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 OPRD1P41143 372 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 MAP3K8P41279 467 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 GLP1RP43220 463 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR1G1P47890 313 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 FNTBP49356 437 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 PGFP49763 221 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 P2RY4P51582 365 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 MANFP55145 182 aaKnown RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 OR10A3P58181 314 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TAS2R50P59544 299 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ACTBP60709 375 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SPCS3P61009 180 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ACTR1AP61163 376 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ST8SIA6P61647 398 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SNRPEP62304 92 aaKnown RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 PPP2CBP62714 309 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ACTG1P63261 375 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 PPP2CAP67775 309 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ARF5P84085 180 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ZXDBP98169 803 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 HNF4GQ14541 408 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 CDK5R1Q15078 307 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 HSPB2Q16082 182 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TMEM69Q5SWH9 247 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ADGRF1Q5T601 910 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 PRAMEF18Q5VWM3 479 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 IL20RBQ6UXL0 311 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 DCXRQ7Z4W1 244 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 NAA40Q86UY6 237 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TMEM200AQ86VY9 491 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 CPOQ8IVL8 374 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 ADGRG2Q8IZP9 1017 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 BEST3Q8N1M1 668 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SIRT6Q8N6T7 355 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 DCAF4L2Q8NA75 395 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 INO80EQ8NBZ0 244 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 OR4D11Q8NGI4 311 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR5M8Q8NGP6 311 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR2T27Q8NH04 317 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR4Q3Q8NH05 313 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 LGALS14Q8TCE9 139 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 HASPINQ8TF76 798 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 RSC1A1Q92681 617 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 GHSRQ92847 366 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 RAB7BQ96AH8 199 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TMEM169Q96HH4 297 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 OR5B2Q96R09 309 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 S100A13Q99584 98 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 CRB3Q9BUF7 120 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SGPP1Q9BX95 441 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 PRDM14Q9GZV8 571 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 RHBGQ9H310 441 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms