RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 RPS4Y1P22090 263 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 SERPINB5P36952 375 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 GPR6P46095 362 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 SPANXN4Q5MJ08 99 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 ELFN2Q5R3F8 820 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 C1orf140Q5VVS0 124 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 MDP1Q86V88 176 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 PNPT1Q8TCS8 783 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 SLC25A36Q96CQ1 311 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 LINC00470Q9BZP3 86 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 AKTIPQ9H8T0 292 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 TREM2Q9NZC2 230 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 PCDHB10Q9UN67 800 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 RASD1Q9Y272 281 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 CMAHPQ9Y471 501 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 TGP01266 2768 aa12.07□□□□□ -0.48
SMARCA4-206ENST00000538456 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 TMEM89A2RUT3 159 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 TMEM229AB2RXF0 380 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 M0R233 179 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 HPXP02790 462 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 H2AFXP16104 143 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 CREB1P16220 341 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ARR3P36575 388 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ALDH3B1P43353 468 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 HILS1P60008 231 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 COPZ1P61923 177 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 CASP8Q14790 479 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 GSTA3Q16772 222 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 CEACAM16Q2WEN9 425 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 COX20Q5RI15 118 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ATG16L1Q676U5 607 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 WBP2NLQ6ICG8 309 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF836Q6ZNA1 936 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 VRK2Q86Y07 508 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 TESCQ96BS2 214 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 ARGLU1Q9NWB6 273 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 REV1Q9UBZ9 1251 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 SEC14L4Q9UDX3 406 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
SMARCA4-206ENST00000538456 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 CDHR4A6H8M9 788 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 E9PBE3 544 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 SYNGR3O43761 229 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 SLC43A1O75387 559 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 HLA-HP01893 362 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 TFPTP0C1Z6 253 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 GAAP10253 952 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 PNMTP11086 282 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 PRG2P13727 222 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF43P17038 809 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 EPHA1P21709 976 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 NR4A1P22736 598 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 COL8A2P25067 703 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 ACAA2P42765 397 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 RPS5P46782 204 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 NME5P56597 212 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 MAD2L1BPQ15013 274 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 SMU1Q2TAY7 513 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
SMARCA4-206ENST00000538456 CCDC154A6NI56 674 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 PPIHO43447 177 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 ZNF432O94892 652 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 AHSA1O95433 338 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 TFP02787 698 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 GSNP06396 782 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 CD79AP11912 226 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 ACHEP22303 614 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 GTF2E2P29084 291 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 S100A3P33764 101 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 CDKN2CP42773 168 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 ANXA11P50995 505 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 SEC24CP53992 1094 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 VSNL1P62760 191 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 LIN52Q52LA3 116 aa12.04□□□□□ -0.48
SMARCA4-206ENST00000538456 TRIML2Q8N7C3 387 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms