RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 YES1P07947 543 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 RHCEP18577 417 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 RRM2P31350 389 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 RBM34P42696 430 aaKnown RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 GPR4P46093 362 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 OR3A2P47893 321 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 SELENOPP49908 381 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 IST1P53990 364 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 ST3GAL3Q11203 375 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 TRAM2Q15035 370 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PDK3Q15120 406 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PHYHD1Q5SRE7 291 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 TTC33Q6PID6 262 aaPredicted RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 GABRG1Q8N1C3 465 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 OR52J3Q8NH60 311 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 TXNDC15Q96J42 360 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PIP5K1AQ99755 562 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 TAPBPLQ9BX59 468 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 ENKD1Q9H0I2 346 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 TIGARQ9NQ88 270 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PLSCR4Q9NRQ2 329 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 MRPL39Q9NYK5 338 aaKnown RBP11.58□□□□□ -0.56
CHFR-216ENST00000538235 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 LYVE1Q9Y5Y7 322 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 MSTNO14793 375 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 SIAH2O43255 324 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 ZNF432O94892 652 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 PLGP00747 810 aaPredicted RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 H1F0P07305 194 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 IFI30P13284 250 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 UQCRC1P31930 480 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 OMPP47874 163 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 CTBP2P56545 445 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 RPS4XP62701 263 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 SPIBQ01892 262 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 PRKCDQ05655 676 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 DGCR6Q14129 220 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 FLOT2Q14254 428 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 POU4F3Q15319 338 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 EXOC3L2Q2M3D2 409 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 MTX3Q5HYI7 312 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 ANKRD34AQ69YU3 496 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 C5orf46Q6UWT4 87 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 SEZ6L2Q6UXD5 910 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 GPAT4Q86UL3 456 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 C10orf67Q8IYJ2 551 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 ADPRHL1Q8NDY3 354 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 ACOT11Q8WXI4 607 aaPredicted RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 FAM46AQ96IP4 442 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 FNDC11Q9BVV2 318 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 RBM24Q9BX46 236 aaKnown RBP11.57□□□□□ -0.56
CHFR-216ENST00000538235 SLC19A3Q9BZV2 496 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 FKRPQ9H9S5 495 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 GP6Q9HCN6 339 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 KCNJ16Q9NPI9 418 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 MED29Q9NX70 200 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 EMC9Q9Y3B6 208 aa11.57□□□□□ -0.56
CHFR-216ENST00000538235 TRAV27A0A087WT01 109 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 DHRS12A0PJE2 317 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 SH3PXD2BA1X283 911 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 AQP12BA6NM10 295 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 C11orf98E9PRG8 122 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 PDLIM1O00151 329 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 EIF1BO60739 113 aaKnown RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 ITGA5P08648 1049 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 PRF1P14222 555 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 IGHV1-2P23083 117 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 AQP2P41181 271 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 RUNX1T1Q06455 604 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 RPL18Q07020 188 aaKnown RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 DBPQ10586 325 aaPredicted RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 MELKQ14680 651 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 FGD3Q5JSP0 725 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 TMEM201Q5SNT2 666 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 TSPO2Q5TGU0 170 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 EEF1A1P5Q5VTE0 462 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 ZNF770Q6IQ21 691 aaPredicted RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 STAC2Q6ZMT1 411 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 MBOAT2Q6ZWT7 520 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 H1FNTQ75WM6 255 aaPredicted RBP11.56□□□□□ -0.56
CHFR-216ENST00000538235 IGFN1Q86VF2 1251 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 MCEMP1Q8IX19 187 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 AQP12AQ8IXF9 295 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 ZNF295-AS1Q8N0V1 137 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 TMEM123Q8N131 208 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 C10orf53Q8N6V4 93 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
CHFR-216ENST00000538235 OR9Q2Q8NGE9 314 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms