RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ZNF700Q9H0M5 742 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 CDH20Q9HBT6 801 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ZNF223Q9UK11 482 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 MRPS7Q9Y2R9 242 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 PCDHGB6Q9Y5F9 930 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 NUP210Q8TEM1 1887 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 VGLL3A8MV65 326 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 CASQ2O14958 399 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 TMCC2O75069 709 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 NKX2-2O95096 273 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 HLA-DOBP13765 273 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ANPEPP15144 967 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PSMA3P25788 255 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 CAPZA1P52907 286 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ADAM8P78325 824 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 RBBP4Q09028 425 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 CLPPQ16740 277 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 SAXO2Q658L1 398 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 METAP1DQ6UB28 335 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 KRT77Q7Z794 578 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 CPOQ8IVL8 374 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 RIMKLAQ8IXN7 391 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PSMF1Q92530 271 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PIK3IP1Q96FE7 263 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 LRFN5Q96NI6 719 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ZNF300Q96RE9 604 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 BARD1Q99728 777 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 PIP5K1AQ99755 562 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 NDRG3Q9UGV2 375 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 SLC5A6Q9Y289 635 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 MGAM2Q2M2H8 2515 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 FITM1A5D6W6 292 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 OR2T1O43869 369 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 XPNPEP2O43895 674 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 SNAP29O95721 258 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 RAB40ALP0C0E4 278 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 MYL12AP19105 171 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 MST1P26927 711 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 RGS6P49758 472 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ZNF84P51523 738 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 DSCR4P56555 118 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 MED21Q13503 144 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 TMEM205Q6UW68 189 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 PTOV1Q86YD1 416 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 DNAJA4Q8WW22 397 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 PPP1R14AQ96A00 147 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ASB9Q96DX5 294 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 MAELQ96JY0 434 aaKnown RBP6.52□□□□□ -1.37
MSH6-209ENST00000538136 HS6ST2Q96MM7 605 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 TM9SF2Q99805 663 aa6.52□□□□□ -1.37
MSH6-209ENST00000538136 ARFGEF3Q5TH69 2177 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 UNC119BA6NIH7 251 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ANKRD28O15084 1053 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 ENTPD1P49961 510 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SELENOVP59797 346 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 KEAP1Q14145 624 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ARHGAP11BQ3KRB8 267 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 OR7E24Q6IFN5 339 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 VWA1Q6PCB0 445 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 CXorf67Q86X51 503 aaPredicted RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 DTX3Q8N9I9 347 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 NUBPLQ8TB37 319 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 DTNBP1Q96EV8 351 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 OR52D1Q9H346 318 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 CCNB1IP1Q9NPC3 277 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 INIPQ9NRY2 104 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SCN3BQ9NY72 215 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 KLHL9Q9P2J3 617 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 GPC6Q9Y625 555 aaPredicted RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 A0A087WUU8 490 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 A8MVM7 634 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 MFN2O95140 757 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 OR5F1O95221 314 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 TGM6O95932 706 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 QDPRP09417 244 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 CLUP10909 449 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 GGT1P19440 569 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 PSMB10P40306 273 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 MAGEA2P43356 314 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SELENOPP49908 381 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SLC3A1Q07837 685 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 PUDPQ08623 228 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 HIKESHIQ53FT3 197 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 PIGGQ5H8A4 983 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 MEX3BQ6ZN04 569 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 RBMXL3Q8N7X1 1067 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 TRMT10AQ8TBZ6 339 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 TTC9Q92623 222 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 HAS2Q92819 552 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 BBC3Q96PG8 261 aaPredicted RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 ZNF385AQ96PM9 386 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 B3GAT2Q9NPZ5 323 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 KCNE5Q9UJ90 142 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 A0A087WV62 115 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms