RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZNF813Q6ZN06 617 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 OR56A3Q8NH54 315 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 OR52I2Q8NH67 350 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SVIPQ8NHG7 77 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 GPBAR1Q8TDU6 330 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC25A36Q96CQ1 311 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 CHST5Q9GZS9 411 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF350Q9GZX5 532 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM27Q9HBJ8 222 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 MYOZ1Q9NP98 299 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ELOVL2Q9NXB9 296 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ACTL6AO96019 429 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 LAMP1P11279 417 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM11P17152 192 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 AVPR2P30518 371 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 GABREP78334 506 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 GAMTQ14353 236 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 JMJD6Q6NYC1 403 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 C6orf120Q7Z4R8 191 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SPEM1Q8N4L4 309 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 OR52N2Q8NGI0 321 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM159Q96B96 161 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 MARS2Q96GW9 593 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 APIPQ96GX9 242 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 LRIG1Q96JA1 1093 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SULT4A1Q9BR01 284 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 FNDC11Q9BVV2 318 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 PRDM13Q9H4Q3 707 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 RHOFQ9HBH0 211 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC35A3Q9Y2D2 325 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 hCG_1809904A0A1W2PP81 198 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 A0A1W2PPH5 198 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 A0A1W2PR64 198 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 A0A1W2PRV1 198 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ACOT7O00154 380 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 EMC8O43402 210 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ARL6IP5O75915 188 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 THEGLP0DJG4 465 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 HSD3B1P14060 373 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ARL4DP49703 201 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 PRKXP51817 358 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 CRYBA2P53672 197 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 IL10RAQ13651 578 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ATXN7L2Q5T6C5 722 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ENPP7Q6UWV6 458 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 C1orf216Q8TAB5 229 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC35A5Q9BS91 424 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 FBXW2Q9UKT8 454 aa10.04□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 RNASEK-C17orf49H0YIS7 233 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 AK1P00568 194 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 ANXA5P08758 320 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 RNH1P13489 461 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 AMD1P17707 334 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 BEX5Q5H9J7 111 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 EIF5AL1Q6IS14 154 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 ARMC6Q6NXE6 501 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 VITQ6UXI7 678 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 TAAR9Q96RI9 348 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 UTP23Q9BRU9 249 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 EXO5Q9H790 373 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 MIEF1Q9NQG6 463 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 KDM4EB2RXH2 506 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 HSPA12AO43301 675 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 PMP2P02689 132 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 SPARCP09486 303 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 BMP7P18075 431 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 GJA4P35212 333 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 PTGER3P43115 390 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 CASP9P55211 416 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 RING1Q06587 406 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 PLA2G7Q13093 441 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNHIT3Q15649 155 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC25A35Q3KQZ1 300 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC35D3Q5M8T2 416 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 FAM151BQ6UXP7 276 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 NDUFAF7Q7L592 441 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 SDR9C7Q8NEX9 313 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 S100A16Q96FQ6 103 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 GPR52Q9Y2T5 361 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 EDDM13A0A1B0GTR0 161 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 BLOC1S5-TXNDC5H3BN57 136 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 SCAMP2O15127 329 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 C1QCP02747 245 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 MT-ND5P03915 603 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM115Q12893 351 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 TOMM34Q15785 309 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 AKR1C8PQ5T2L2 129 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 PAQR9Q6ZVX9 377 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 DTWD2Q8NBA8 298 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 R3HDM4Q96D70 268 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 TRIB3Q96RU7 358 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms