RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ZNF432O94892 652 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 LYPD3O95274 346 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 BGLAPP02818 100 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 CD3EP07766 207 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 GTF2E2P29084 291 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ENTPD8Q5MY95 495 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 H1FNTQ75WM6 255 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ABHD12BQ7Z5M8 362 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 SCAIQ8N9R8 606 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ANKK1Q8NFD2 765 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF417Q8TAU3 575 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC26A7Q8TE54 656 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ADAMTS16Q8TE57 1224 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF587Q96SQ5 575 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 CCL19Q99731 98 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF426Q9BUY5 554 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 LINC00470Q9BZP3 86 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 FAM220BPB1ANY3 271 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 THY1P04216 161 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 COX4I1P13073 169 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF43P17038 809 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 GRPRP30550 384 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 SELENOPP49908 381 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 LTBQ06643 244 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 SHEQ5VZ18 495 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 ALKBH2Q6NS38 261 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 C8orf82Q6P1X6 216 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 NHLRC1Q6VVB1 395 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 TSPYL5Q86VY4 417 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 RBM45Q8IUH3 476 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 KDM8Q8N371 416 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 WDR31Q8NA23 367 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 AKAP1Q92667 903 aaKnown RBP eCLIP15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 RCN3Q96D15 328 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 DLL4Q9NR61 685 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC17A5Q9NRA2 495 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 BAG5Q9UL15 447 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 USP22Q9UPT9 525 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 AP3M1Q9Y2T2 418 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 ZANQ9Y493 2812 aa15.1■□□□□ 0.01
SFSWAP-205ENST00000537164 TRAPPC13A5PLN9 417 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MS4A18H0YCH9 400 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 RPL36A-HNRNPH2H7BZ11 118 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 TRAF3IP2O43734 574 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 SMPD2O60906 423 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MT-ATP6P00846 226 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 DANCRP0C864 163 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 CD99P14209 185 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 NKX6-1P78426 367 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MS4A18Q3C1V0 323 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF672Q499Z4 452 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 PRSS57Q6UWY2 283 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 SPATA21Q7Z572 469 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 ARPINQ7Z6K5 226 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 P3H2Q8IVL5 708 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 POU5F2Q8N7G0 328 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 OR52N5Q8NH56 324 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MPP4Q96JB8 637 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 RADILQ96JH8 1075 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 GSX2Q9BZM3 304 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC19A3Q9BZV2 496 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 POLR2J2Q9GZM3 115 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 POLR2J3Q9H1A7 115 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MYLK2Q9H1R3 596 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF701Q9NV72 531 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 MRPL39Q9NYK5 338 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 AMDHD2Q9Y303 409 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 ALPK2Q86TB3 2170 aa15.09■□□□□ 0.01
SFSWAP-205ENST00000537164 ZFHX3Q15911 3703 aa15.08■□□□□ 0.01
SFSWAP-205ENST00000537164 HEATR1Q9H583 2144 aaKnown RBP15.08■□□□□ 0.01
SFSWAP-205ENST00000537164 CPSF4LA6NMK7 179 aaKnown RBP15.08■□□□□ 0
SFSWAP-205ENST00000537164 SHISA9B4DS77 424 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 IFNA14P01570 189 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 PTAFRP25105 342 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 CLDN17P56750 224 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 FOXD4Q12950 439 aaPredicted RBP15.08■□□□□ 0
SFSWAP-205ENST00000537164 NIPAL3Q6P499 406 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 TMEM108Q6UXF1 575 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 HACD2Q6Y1H2 254 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 WDR88Q6ZMY6 472 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 LINGO2Q7L985 606 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 TREML1Q86YW5 311 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 SLC15A3Q8IY34 581 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 WFDC11Q8NEX6 87 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 OR2T12Q8NG77 320 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 VANGL1Q8TAA9 524 aaPredicted RBP15.08■□□□□ 0
SFSWAP-205ENST00000537164 PROX1Q92786 737 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 FBXW5Q969U6 566 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 MOGAT1Q96PD6 335 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 HOPXQ9BPY8 73 aaPredicted RBP15.08■□□□□ 0
SFSWAP-205ENST00000537164 CMTM6Q9NX76 183 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 MGAT4BQ9UQ53 548 aa15.08■□□□□ 0
SFSWAP-205ENST00000537164 USF3Q68DE3 2245 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 ELOVL7A1L3X0 281 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 ZNF587BE7ETH6 402 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 OVOL3O00110 214 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 CLOCKO15516 846 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 ARHGEF9O43307 516 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 HPRP00739 348 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 FOSL1P15407 271 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms