RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CLPSP04118 112 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SRMP19623 302 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 MAOBP27338 520 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 CDKN2AP42771 156 aaKnown RBP12.01□□□□□ -0.49
LDLR-203ENST00000535915 FASLGP48023 281 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 GFERP55789 205 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 TNK1Q13470 666 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ELOCQ15369 112 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ISXQ2M1V0 245 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 CBLN3Q6UW01 205 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 PLCZ1Q86YW0 608 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SIAH3Q8IW03 269 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 LGALS14Q8TCE9 139 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 PHF21AQ96BD5 680 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ORAI3Q9BRQ5 295 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 GON7Q9BXV9 100 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SPRTNQ9H040 489 aaPredicted RBP12.01□□□□□ -0.49
LDLR-203ENST00000535915 MED28Q9H204 178 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 PNO1Q9NRX1 252 aaKnown RBP12.01□□□□□ -0.49
LDLR-203ENST00000535915 C2orf42Q9NWW7 574 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 IGHV5-51A0A0C4DH38 117 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ACOD1A6NK06 481 aa12□□□□□ -0.49
LDLR-203ENST00000535915 A8MUA0 341 aa12□□□□□ -0.49
LDLR-203ENST00000535915 CHURC1-FNTBB4DL54 471 aa12□□□□□ -0.49
LDLR-203ENST00000535915 SCDO00767 359 aa12□□□□□ -0.49
LDLR-203ENST00000535915 GPRIN2O60269 458 aa12□□□□□ -0.49
LDLR-203ENST00000535915 CD1AP06126 327 aa12□□□□□ -0.49
LDLR-203ENST00000535915 PNMTP11086 282 aa12□□□□□ -0.49
LDLR-203ENST00000535915 CD1CP29017 333 aa12□□□□□ -0.49
LDLR-203ENST00000535915 FNTBP49356 437 aa12□□□□□ -0.49
LDLR-203ENST00000535915 HSF2Q03933 536 aa12□□□□□ -0.49
LDLR-203ENST00000535915 SERTAD2Q14140 314 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF74Q16587 644 aa12□□□□□ -0.49
LDLR-203ENST00000535915 BTBD16Q32M84 506 aa12□□□□□ -0.49
LDLR-203ENST00000535915 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
LDLR-203ENST00000535915 IZUMO1Q8IYV9 350 aa12□□□□□ -0.49
LDLR-203ENST00000535915 FAM109AQ8N4B1 249 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF321PQ8N8H1 164 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF511Q8NB15 262 aa12□□□□□ -0.49
LDLR-203ENST00000535915 C7orf57Q8NEG2 295 aa12□□□□□ -0.49
LDLR-203ENST00000535915 MOGAT1Q96PD6 335 aa12□□□□□ -0.49
LDLR-203ENST00000535915 DERL3Q96Q80 235 aa12□□□□□ -0.49
LDLR-203ENST00000535915 GTPBP2Q9BX10 602 aaKnown RBP12□□□□□ -0.49
LDLR-203ENST00000535915 TPSD1Q9BZJ3 242 aa12□□□□□ -0.49
LDLR-203ENST00000535915 SLC25A18Q9H1K4 315 aa12□□□□□ -0.49
LDLR-203ENST00000535915 RXFP3Q9NSD7 469 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF346Q9UL40 294 aaKnown RBP12□□□□□ -0.49
LDLR-203ENST00000535915 RP1P56715 2156 aa12□□□□□ -0.49
LDLR-203ENST00000535915 TCRBP04435 133 aa12□□□□□ -0.49
LDLR-203ENST00000535915 GIFP27352 417 aa12□□□□□ -0.49
LDLR-203ENST00000535915 GABRA4P48169 554 aa12□□□□□ -0.49
LDLR-203ENST00000535915 CTXN1P60606 82 aa12□□□□□ -0.49
LDLR-203ENST00000535915 IL10RAQ13651 578 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ALG10Q5BKT4 473 aa12□□□□□ -0.49
LDLR-203ENST00000535915 HES5Q5TA89 166 aa12□□□□□ -0.49
LDLR-203ENST00000535915 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
LDLR-203ENST00000535915 MTFR2Q6P444 385 aa12□□□□□ -0.49
LDLR-203ENST00000535915 PRSS45Q7RTY3 260 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ATG4DQ86TL0 474 aaPredicted RBP12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF433Q8N7K0 673 aaPredicted RBP12□□□□□ -0.49
LDLR-203ENST00000535915 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
LDLR-203ENST00000535915 ZSCAN1Q8NBB4 408 aa12□□□□□ -0.49
LDLR-203ENST00000535915 FAM71CQ8NEG0 241 aa12□□□□□ -0.49
LDLR-203ENST00000535915 GPX7Q96SL4 187 aaPredicted RBP12□□□□□ -0.49
LDLR-203ENST00000535915 PELOQ9BRX2 385 aaKnown RBP12□□□□□ -0.49
LDLR-203ENST00000535915 PDE7BQ9NP56 450 aa12□□□□□ -0.49
LDLR-203ENST00000535915 C12orf4Q9NQ89 552 aa12□□□□□ -0.49
LDLR-203ENST00000535915 CAMK2AQ9UQM7 478 aa12□□□□□ -0.49
LDLR-203ENST00000535915 ZNF281Q9Y2X9 895 aa12□□□□□ -0.49
LDLR-203ENST00000535915 NUBP2Q9Y5Y2 271 aa12□□□□□ -0.49
LDLR-203ENST00000535915 OR2B3O76000 313 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 F13BP05160 661 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 MAGEB1P43366 347 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 NANOS3P60323 173 aaKnown RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 SNRPD2P62316 118 aaKnown RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 SKP2Q13309 424 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 FCN2Q15485 313 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 FAM205BPQ63HN1 556 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 UNQ9370/PRO34162Q6UXP9 181 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 LSM14AQ8ND56 463 aaKnown RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 HAVCR2Q8TDQ0 301 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 DEDD2Q8WXF8 326 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 ZNF285Q96NJ3 590 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 HIF3AQ9Y2N7 669 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 ALPK2Q86TB3 2170 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 MEN1O00255 615 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 PIN1P1O15428 100 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 ZNF264O43296 627 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 AKR7A2O43488 359 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 GMFGO60234 142 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 CD14P08571 375 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 TCTE1Q5JU00 501 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 APOOLQ6UXV4 268 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms