RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NR2F1P10589 423 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 PCMT1P22061 227 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC1A6P48664 564 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 COMPP49747 757 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 SELENOPP49908 381 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 COPZ1P61923 177 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 UFM1P61960 85 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 OR7A5Q15622 319 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 CHI3L2Q15782 390 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 GLIPR1L2Q4G1C9 344 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 PDCD4Q53EL6 469 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 COX20Q5RI15 118 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEM123Q8N131 208 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 OR52P1PQ8NH57 321 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 HTRA1Q92743 480 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 OXGR1Q96P68 337 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 OR52E6Q96RD3 313 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 TAPBPLQ9BX59 468 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 BPESC1Q9GZL8 116 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 ARMC7Q9H6L4 198 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 SDR39U1Q9NRG7 319 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 RLIMQ9NVW2 624 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 P2RX2Q9UBL9 471 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 HDAC3O15379 428 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 UPK3AO75631 287 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 LGI1O95970 557 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 TGFAP01135 160 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 PNMTP11086 282 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 IDO1P14902 403 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 ETS2P15036 469 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 HOXB9P17482 250 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 NPR2P20594 1047 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 CALCRP30988 508 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 CDKN2CP42773 168 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 CHN2P52757 468 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 DVL1P1P54792 670 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 CDH15P55291 814 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 VSNL1P62760 191 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 FADDQ13158 208 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 MPP2Q14168 576 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 MFSD13AQ14CX5 517 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 LARS2Q15031 903 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 FAM69AQ5T7M9 428 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF836Q6ZNA1 936 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 CLIP4Q8N3C7 705 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 LINC01356Q8N9X3 169 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 SOX7Q9BT81 388 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 NUF2Q9BZD4 464 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 EVA1AQ9H8M9 152 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 TPT1P8Q9HAU6 139 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC6A13Q9NSD5 602 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 ZIM2Q9NZV7 527 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF232Q9UNY5 417 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF443Q9Y2A4 671 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 PKD1L1Q8TDX9 2849 aa9.7□□□□□ -0.86
CLSTN3-206ENST00000535668 TRPC5OSA6NMA1 111 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF99A8MXY4 864 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 RFXANKO14593 260 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 KLF11O14901 512 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 ERCC1P07992 297 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF35P13682 527 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 DAOP14920 347 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 CCNA2P20248 432 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 NR4A1P22736 598 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 BST1Q10588 318 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 GGTLC2Q14390 218 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 CR1LQ2VPA4 569 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 MMEL1Q495T6 779 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC9B1Q4ZJI4 515 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 C9orf135Q5VTT2 229 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 FAM91A1Q658Y4 838 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF621Q6ZSS3 439 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC46A3Q7Z3Q1 461 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 CROCCP2Q86T23 111 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 GPAT4Q86UL3 456 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 SCAIQ8N9R8 606 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 DNAJA4Q8WW22 397 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 KCNS3Q9BQ31 491 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 GPR35Q9HC97 309 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 A4GALTQ9NPC4 353 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 FBXL3Q9UKT7 428 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 CORINQ9Y5Q5 1042 aa9.69□□□□□ -0.86
CLSTN3-206ENST00000535668 B4DSR2 109 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 TCF21O43680 179 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 TRAF3IP2O43734 574 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC43A1O75387 559 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ERLIN1O75477 346 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 AHSA1O95433 338 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 GKN3PP0CG01 181 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 PRG2P13727 222 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF14P17017 642 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF43P17038 809 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 PRKAR1BP31321 381 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 THBS4P35443 961 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 GLRXP35754 106 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms