RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CHD3Q12873 2000 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 A0A096LPE4 126 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 LOC100289279A0A1B0GTE1 492 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 A0A1W2PPZ6 126 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 PRAMEF27A3QJZ7 478 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF726A6NNF4 738 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 GPRIN2O60269 458 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 OR6A2O95222 327 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 OR4A8P0C604 315 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ETS2P15036 469 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 PCMT1P22061 227 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ARR3P36575 388 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 SELENOPP49908 381 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC18A1P54219 525 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 GALK2Q01415 458 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ROR2Q01974 943 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 SQLEQ14534 574 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 C3orf36Q3SXR2 165 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ALG10BQ5I7T1 473 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 GCNT6Q5T4J0 391 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 FAM69AQ5T7M9 428 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 B3GLCTQ6Y288 498 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 RANBP3LQ86VV4 465 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 MAGEE2Q8TD90 523 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 OXGR1Q96P68 337 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 EVA1AQ9H8M9 152 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 CHODLQ9H9P2 273 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 C12orf10Q9HB07 376 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 SDR39U1Q9NRG7 319 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 USP22Q9UPT9 525 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 CORINQ9Y5Q5 1042 aa11.57□□□□□ -0.56
CLSTN3-205ENST00000535452 ARPC4-TTLL3A0A0A6YYG9 625 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 NPR2P20594 1047 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC6A2P23975 617 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 IL12AP29459 219 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 PRKAR1BP31321 381 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 MAGOHP61326 146 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 KRTAP1-1Q07627 177 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 NPRL3Q12980 569 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 RGNQ15493 299 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 RPS26P11Q5JNZ5 115 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 LIPNQ5VXI9 398 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 ULK3Q6PHR2 472 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 CSPG4Q6UVK1 2322 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 SERPINA11Q86U17 422 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 LRRC8CQ8TDW0 803 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 NEU4Q8WWR8 484 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC47A1Q96FL8 570 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 PLK3Q9H4B4 646 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 BCL2L10Q9HD36 194 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 A4GALTQ9NPC4 353 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 FBXL3Q9UKT7 428 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 POFUT2Q9Y2G5 429 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 DSPPQ9NZW4 1301 aa11.56□□□□□ -0.56
CLSTN3-205ENST00000535452 FREM1Q5H8C1 2179 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 TRAV36DV7A0A075B6V5 113 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 IGHV1-18A0A0C4DH31 117 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 SNNO75324 88 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 NTF4P34130 210 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 ACAA2P42765 397 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 NR4A2P43354 598 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 PPOXP50336 477 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 IDH3GP51553 393 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 FOXG1P55316 489 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 RGS8P57771 180 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 NAAAQ02083 359 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 SCGB2A2Q13296 93 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 TRMT5Q32P41 509 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 GKAP1Q5VSY0 366 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 REEP3Q6NUK4 255 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 H1FNTQ75WM6 255 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 SPATA21Q7Z572 469 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 CLIP4Q8N3C7 705 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 FAM169BQ8N8A8 192 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 OR6N1Q8NGY5 312 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 VPS33AQ96AX1 596 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 CRLF2Q9HC73 371 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 TCF7L2Q9NQB0 619 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 TESQ9UGI8 421 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 RAB21Q9UL25 225 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 ANGPT4Q9Y264 503 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 VPS13CQ709C8 3753 aa11.55□□□□□ -0.56
CLSTN3-205ENST00000535452 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 hCG_2039718K7EN88 272 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 HAX1O00165 279 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 NR5A2O00482 541 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 PHF1O43189 567 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 TGDSO95455 350 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 RAB36O95755 333 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 C8BP07358 591 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 CD79AP11912 226 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 CBR1P16152 277 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 AHCYP23526 432 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 SRP14P37108 136 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 CHN2P52757 468 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms