RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 MAGEA8P43361 318 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 SEC61GP60059 68 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 ACTA1P68133 377 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 DPYSL2Q16555 572 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 PHYHD1Q5SRE7 291 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 PDZK1Q5T2W1 519 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 TPGS2Q68CL5 300 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 COX15Q7KZN9 410 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 GDPD3Q7L5L3 318 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 TRIM69Q86WT6 500 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 OR51S1Q8NGJ8 323 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 BRSK1Q8TDC3 778 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 RNF139Q8WU17 664 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 CHCHD10Q8WYQ3 142 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 EFHD2Q96C19 240 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 TUBGCP3Q96CW5 907 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 SLC38A2Q96QD8 506 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 HDHD3Q9BSH5 251 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 YY1AP1Q9H869 796 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 SGK2Q9HBY8 427 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 EML4Q9HC35 981 aaKnown RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 TM9SF3Q9HD45 589 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 ZNF639Q9UID6 485 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 V9GY05 133 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 KANK1Q14678 1352 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 ARHGAP21Q5T5U3 1957 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 A0A096LNJ9 63 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 IGHV3-64DA0A0J9YX35 117 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 PCP4L1A6NKN8 68 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 OR52A4PA6NMU1 304 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 H0Y8G0 127 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 LAD1O00515 517 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 HCRTR1O43613 425 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 ICAM2P13598 275 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 NCK1P16333 377 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 ZNF823P16415 610 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 POLR2EP19388 210 aaKnown RBP2.95□□□□□ -1.94
PRKDC-205ENST00000535375 FGF9P31371 208 aaPredicted RBP2.95□□□□□ -1.94
PRKDC-205ENST00000535375 YWHABP31946 246 aaKnown RBP2.95□□□□□ -1.94
PRKDC-205ENST00000535375 QARSP47897 775 aaKnown RBP2.95□□□□□ -1.94
PRKDC-205ENST00000535375 DAP3P51398 398 aaKnown RBP2.95□□□□□ -1.94
PRKDC-205ENST00000535375 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 ACTR3P61158 418 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 IDI1Q13907 227 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 CCDC183Q5T5S1 534 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 OR52W1Q6IF63 320 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 C6orf120Q7Z4R8 191 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 DHDDSQ86SQ9 333 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 CDH26Q8IXH8 852 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 OR56B4Q8NH76 319 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 TMEM158Q8WZ71 300 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 ST8SIA1Q92185 356 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 SLC39A3Q9BRY0 314 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 SELENOIQ9C0D9 397 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 POPDC2Q9HBU9 364 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 PHF11Q9UIL8 331 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 TBX21Q9UL17 535 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 TRAF3IP3Q9Y228 551 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 PLEKHH1Q9ULM0 1364 aa2.95□□□□□ -1.94
PRKDC-205ENST00000535375 PDS5BQ9NTI5 1447 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 LRCOL1A6NCL2 159 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 VSTM2BA6NLU5 285 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 TRDCB7Z8K6 153 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 FOXE1O00358 373 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 TNFSF13O75888 250 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 CLDN9O95484 217 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 AP2A1O95782 977 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 LGI1O95970 557 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 LGALS2P05162 132 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 HSMCR30P0CW71 290 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RBMY1CP0DJD4 496 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 COX5AP20674 150 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RPL13AP40429 203 aaKnown RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 PMELP40967 661 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 LEPP41159 167 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 KPNA2P52292 529 aaKnown RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 CDH4P55283 916 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 BST1Q10588 318 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 GRB7Q14451 532 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 TRIM16LQ309B1 348 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 PIGGQ5H8A4 983 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 CTSL3PQ5NE16 218 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 C1orf100Q5SVJ3 147 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 C11orf71Q6IPW1 123 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 TMIGD1Q6UXZ0 262 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 CCDC50Q8IVM0 306 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 SLC35F2Q8IXU6 374 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 FAM83FQ8NEG4 500 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 FANK1Q8TC84 345 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 FBXO32Q969P5 355 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 UBE2E3Q969T4 207 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 C10orf35Q96D05 121 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RPRD1AQ96P16 312 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RBM14Q96PK6 669 aaKnown RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RTBDNQ9BSG5 229 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 RAB34Q9BZG1 259 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 ROPN1BQ9BZX4 212 aaPredicted RBP2.94□□□□□ -1.94
PRKDC-205ENST00000535375 OR11A1Q9GZK7 315 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 ROGDIQ9GZN7 287 aa2.94□□□□□ -1.94
PRKDC-205ENST00000535375 METTL7AQ9H8H3 244 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms