RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 CELA3BP08861 270 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 PRG2P13727 222 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 NCF2P19878 526 aaPredicted RBP12.02□□□□□ -0.49
CCDC84-208ENST00000534656 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.49
CCDC84-208ENST00000534656 MVDP53602 400 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 CLDN17P56750 224 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.49
CCDC84-208ENST00000534656 RNF220Q5VTB9 566 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 SPATA21Q7Z572 469 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 MYPOPQ86VE0 399 aaPredicted RBP12.02□□□□□ -0.49
CCDC84-208ENST00000534656 KDM8Q8N371 416 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 CLIP4Q8N3C7 705 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 SVOPLQ8N434 492 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 TMEM109Q9BVC6 243 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 PNPOQ9NVS9 261 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 RCE1Q9Y256 329 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
CCDC84-208ENST00000534656 PCDHB14Q9Y5E9 798 aa12.02□□□□□ -0.49
CCDC84-208ENST00000534656 IGHV2OR16-5A0A0B4J2B6 119 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 RFXANKO14593 260 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 AHSA1O95433 338 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 BCHEP06276 602 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 IGFBP1P08833 259 aaPredicted RBP12.01□□□□□ -0.49
CCDC84-208ENST00000534656 PNMTP11086 282 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ETFAP13804 333 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF43P17038 809 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ITGA2P17301 1181 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ARR3P36575 388 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
CCDC84-208ENST00000534656 CRISP3P54108 245 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 CDH15P55291 814 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 VSNL1P62760 191 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 STX3Q13277 289 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 RIN1Q13671 783 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ADRM1Q16186 407 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 UGT2A3Q6UWM9 527 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 UBASH3BQ8TF42 649 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SLC25A36Q96CQ1 311 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SNX18Q96RF0 628 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 PTDSS2Q9BVG9 487 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SLC6A13Q9NSD5 602 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 CHST2Q9Y4C5 530 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 GPR45Q9Y5Y3 372 aa12.01□□□□□ -0.49
CCDC84-208ENST00000534656 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 SDHDO14521 159 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 TM9SF1O15321 606 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 SLC43A1O75387 559 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 IFNGR1P15260 489 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 BGNP21810 368 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 CRATP43155 626 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 RPS5P46782 204 aaKnown RBP12□□□□□ -0.49
CCDC84-208ENST00000534656 DSTNP60981 165 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 EGR4Q05215 589 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 ATG16L1Q676U5 607 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 SERPINA11Q86U17 422 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 MEX3DQ86XN8 651 aaKnown RBP12□□□□□ -0.49
CCDC84-208ENST00000534656 CCDC36Q8IYA8 594 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 CDK20Q8IZL9 346 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 GPR137CQ8N3F9 429 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 GLB1L3Q8NCI6 653 aaPredicted RBP12□□□□□ -0.49
CCDC84-208ENST00000534656 IL17RDQ8NFM7 739 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 SLC38A5Q8WUX1 472 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 CKAP2Q8WWK9 683 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 OXGR1Q96P68 337 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 ZBTB18Q99592 522 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 ARMC7Q9H6L4 198 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 SSU72Q9NP77 194 aaKnown RBP12□□□□□ -0.49
CCDC84-208ENST00000534656 DYNLRB1Q9NP97 96 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 IFT52Q9Y366 437 aa12□□□□□ -0.49
CCDC84-208ENST00000534656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.498e-8■■□□□ 14.4
CCDC84-208ENST00000534656 A0A0G2JPF8 293 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF503-AS2A6NEH8 195 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 HNRNPCL2B2RXH8 293 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 HNRNPCL3B7ZW38 293 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 FZD7O75084 574 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 ADRA2AP08913 450 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 ZCCHC18P0CG32 403 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 HNRNPCL4P0DMR1 293 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 GTF2E2P29084 291 aaKnown RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 POU3F1Q03052 451 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 NPRL3Q12980 569 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 DAG1Q14118 895 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 TRIP10Q15642 601 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 CEACAM16Q2WEN9 425 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 MDP1Q86V88 176 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 AENQ8WTP8 325 aaKnown RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF837Q96EG3 531 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 KTI12Q96EK9 354 aaPredicted RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 TMEM19Q96HH6 336 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 CACYBPQ9HB71 228 aaKnown RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 NOX3Q9HBY0 568 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 CRLF2Q9HC73 371 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms