RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 MELTFP08582 738 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ALOX5P09917 674 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 CHN1P15882 459 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 FUT4P22083 530 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 CXCR5P32302 372 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 SH3BGRP55822 239 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 POU6F2P78424 691 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 H3F3AP84243 136 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ACSM2AQ08AH3 577 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ZNF763Q0D2J5 394 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 C2orf80Q0P641 193 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 FASTKD3Q14CZ7 662 aaKnown RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 PPP1R7Q15435 360 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 HFEQ30201 348 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 SPIN4Q56A73 249 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 GKAP1Q5VSY0 366 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 ACSM2BQ68CK6 577 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 OGFOD2Q6N063 350 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 CDC73Q6P1J9 531 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 LETMD1Q6P1Q0 360 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 Q6YL49 198 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ZNF551Q7Z340 670 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 LSRQ86X29 649 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 CENPLQ8N0S6 344 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 ZIC4Q8N9L1 334 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 FBXO36Q8NEA4 188 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 BHLHE22Q8NFJ8 381 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 OR9K2Q8NGE7 335 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 OR10S1Q8NGN2 331 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 SNX33Q8WV41 574 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 TMEM234Q8WY98 164 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 DYRK2Q92630 601 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 UPRTQ96BW1 309 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 B9D2Q9BPU9 175 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 NAA11Q9BSU3 229 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 THUMPD3Q9BV44 507 aaKnown RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 BTBD2Q9BX70 525 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 HOXD1Q9GZZ0 328 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 TOR3AQ9H497 397 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 NOX4Q9NPH5 578 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 CTPS2Q9NRF8 586 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ACER3Q9NUN7 267 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 NKIRAS2Q9NYR9 191 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 GRHL1Q9NZI5 618 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 TMEM181Q9P2C4 612 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 OR5V1Q9UGF6 321 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 CHRNA9Q9UGM1 479 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 POLR3KQ9Y2Y1 108 aaPredicted RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 POMT1Q9Y6A1 747 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 U3KQE9 123 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 DSPPQ9NZW4 1301 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 A8MXK9 166 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 EIF1BO60739 113 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 DNAJA2O60884 412 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 UPK3AO75631 287 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 RSL1D1O76021 490 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 ZNF432O94892 652 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 ANXA4P09525 319 aaPredicted RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 PPIAL4GP0DN37 164 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 HSD3B1P14060 373 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 HSD3B2P26439 372 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CRABP2P29373 138 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 GSTT1P30711 240 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CD80P33681 288 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 APOBEC1P41238 236 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 GSTM5P46439 218 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CAPZA2P47755 286 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 FNTAP49354 379 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 SELENOPP49908 381 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 ATP12AP54707 1039 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 SEC61A1P61619 476 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 SLC35A1P78382 337 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 ARF1P84077 181 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 GALK2Q01415 458 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 ROR2Q01974 943 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 PAX8Q06710 450 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 EGR3Q06889 387 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 LCP2Q13094 533 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 SKP2Q13309 424 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 FXNQ16595 210 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 TRMT5Q32P41 509 aaKnown RBP5.42□□□□□ -1.54
CD44-237ENST00000534082 KLHL22Q53GT1 634 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 DEFB121Q5J5C9 76 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 Q6ZSV7 163 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 Q6ZTK2 550 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 C1orf174Q8IYL3 243 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 KIF18AQ8NI77 898 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 GRK7Q8WTQ7 553 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 SSMEM1Q8WWF3 244 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CCL17Q92583 94 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CDKL2Q92772 493 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CDS1Q92903 461 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 MISP3Q96FF7 219 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 ELMOD3Q96FG2 381 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CHMP6Q96FZ7 201 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 C16orf58Q96GQ5 468 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 APIPQ96GX9 242 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 TSPAN32Q96QS1 320 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CPNE1Q99829 537 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms