RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FOSL1P15407 271 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF43P17038 809 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 CD247P20963 164 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 NPTX1Q15818 432 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF613Q6PF04 617 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 KLHL17Q6TDP4 642 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 PRSS57Q6UWY2 283 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 TMEM108Q6UXF1 575 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 H1FNTQ75WM6 255 aaPredicted RBP26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 CCDC80Q76M96 950 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 WDR31Q8NA23 367 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 PCYOX1LQ8NBM8 494 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 OXGR1Q96P68 337 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF317Q96PQ6 595 aaPredicted RBP26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 SLC17A5Q9NRA2 495 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 B3GAT1Q9P2W7 334 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 LAMP3Q9UQV4 416 aa26.59■■□□□ 1.85
SSSCA1-207ENST00000533115 ABCD4O14678 606 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 SLC22A2O15244 555 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 ATP8B1O43520 1251 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 PAX1P15863 534 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 CBLP22681 906 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 PTH2RP49190 550 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 ZNF83P51522 516 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 MFSD13AQ14CX5 517 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 RASSF5Q8WWW0 418 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 TMEM43Q9BTV4 400 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 GID8Q9NWU2 228 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 AMDHD2Q9Y303 409 aa26.58■■□□□ 1.85
SSSCA1-207ENST00000533115 SHISA9B4DS77 424 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 DANCRP0C864 163 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 CRYBA2P53672 197 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 CLDN17P56750 224 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 LGALS3BPQ08380 585 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 ENTPD8Q5MY95 495 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 RBM45Q8IUH3 476 aaKnown RBP26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 ADPRHL1Q8NDY3 354 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 OR4D11Q8NGI4 311 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 VANGL1Q8TAA9 524 aaPredicted RBP26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 SMAP2Q8WU79 429 aaPredicted RBP26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 RADILQ96JH8 1075 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 ZNF701Q9NV72 531 aaPredicted RBP26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 ARMCX1Q9P291 453 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 MGAT4BQ9UQ53 548 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 RCE1Q9Y256 329 aa26.57■■□□□ 1.84
SSSCA1-207ENST00000533115 SETD2Q9BYW2 2564 aaPredicted RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 CPSF4LA6NMK7 179 aaKnown RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 ZNF587BE7ETH6 402 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 BGLAPP02818 100 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 CDH2P19022 906 aaPredicted RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 PTNP21246 168 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 PTAFRP25105 342 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 RPS4XP62701 263 aaKnown RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 LTBQ06643 244 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 C1DQ13901 141 aaKnown RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 C1QTNF12Q5T7M4 302 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 LINC00114Q6XXX2 140 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 YTHDF3Q7Z739 585 aaKnown RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 SLC41A3Q96GZ6 507 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 BOD1Q96IK1 185 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 ZNF583Q96ND8 569 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 LINC00470Q9BZP3 86 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 CISD1Q9NZ45 108 aaKnown RBP26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 CORINQ9Y5Q5 1042 aa26.56■■□□□ 1.84
SSSCA1-207ENST00000533115 LOC102725191A0A1B0GVB3 256 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 CHP2O43745 196 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 UPK3AO75631 287 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 SOD3P08294 240 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 SLC25A3Q00325 362 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 IL1RL1Q01638 556 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 VEZF1Q14119 521 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 ERICH5Q6P6B1 374 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 PIAS4Q8N2W9 510 aaPredicted RBP26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 ALKBH3Q96Q83 286 aaPredicted RBP26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 C1QTNF6Q9BXI9 259 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 ASPNQ9BXN1 380 aa26.55■■□□□ 1.84
SSSCA1-207ENST00000533115 MS4A18H0YCH9 400 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 M0R1B8 84 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 ZNF432O94892 652 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 NQO1P15559 274 aaKnown RBP26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 CD40P25942 277 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 CDH11P55287 796 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 RIPPLY3P57055 190 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 MS4A18Q3C1V0 323 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 LINGO2Q7L985 606 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 SCAIQ8N9R8 606 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 ADAMTS16Q8TE57 1224 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 MOGAT1Q96PD6 335 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 USP22Q9UPT9 525 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 MAGED1Q9Y5V3 778 aaPredicted RBP26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 USF3Q68DE3 2245 aa26.54■■□□□ 1.84
SSSCA1-207ENST00000533115 ZFHX3Q15911 3703 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 PRPS1P60891 318 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 PGGHGQ32M88 737 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 HIKESHIQ53FT3 197 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 C10orf53Q8N6V4 93 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 POU5F2Q8N7G0 328 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 OR1K1Q8NGR3 316 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 RP9Q8TA86 221 aaKnown RBP26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 RCN3Q96D15 328 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms