RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 KIRREL1Q96J84 757 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 LYSMD1Q96S90 227 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 PLAGL1Q9UM63 463 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 UBIAD1Q9Y5Z9 338 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ALKQ9UM73 1620 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ANKRD66B4E2M5 251 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ZNF814B7Z6K7 855 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 CNMDO75829 334 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ORM1P02763 201 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 C4BPAP04003 597 aaKnown RBP7.59□□□□□ -1.19
CTNND1-231ENST00000532463 FUT1P19526 365 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 BMP5P22003 454 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.192e-7■■■■□ 23.9
CTNND1-231ENST00000532463 CDC34P49427 236 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-231ENST00000532463 WNT7BP56706 349 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 PPP1CBP62140 327 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 SRYQ05066 204 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ILKQ13418 452 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 IKZF1Q13422 519 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 LTC4SQ16873 150 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 GTDC1Q4AE62 458 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 VARS2Q5ST30 1063 aaKnown RBP7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ZNF684Q5T5D7 378 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 HBMQ6B0K9 141 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 Q6ZN92 141 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.59□□□□□ -1.19
CTNND1-231ENST00000532463 LHX4Q969G2 390 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 CMBLQ96DG6 245 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 TMEM175Q9BSA9 504 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 TMEM43Q9BTV4 400 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 GPR173Q9NS66 373 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 CA14Q9ULX7 337 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 ADCY10Q96PN6 1610 aa7.59□□□□□ -1.19
CTNND1-231ENST00000532463 A0A1W2PPH5 198 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 SCAMP2O15127 329 aaKnown RBP7.59□□□□□ -1.2
CTNND1-231ENST00000532463 ADAM23O75077 832 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 MPC1LP0DKB6 136 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 LGALS4P56470 323 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 CLDN8P56748 225 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 HERVK_113P61574 105 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 RPS15AP62244 130 aaKnown RBP7.59□□□□□ -1.2
CTNND1-231ENST00000532463 SLC24A5Q71RS6 500 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 METTL27Q8N6F8 245 aaPredicted RBP7.59□□□□□ -1.2
CTNND1-231ENST00000532463 OR4A4PQ8NGN8 299 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 SLC7A6Q92536 515 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 PCED1BQ96HM7 432 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 MRPL13Q9BYD1 178 aaKnown RBP7.59□□□□□ -1.2
CTNND1-231ENST00000532463 C20orf85Q9H1P6 137 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 KCNK12Q9HB15 430 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 MCTS1Q9ULC4 181 aaKnown RBP7.59□□□□□ -1.2
CTNND1-231ENST00000532463 CSNK1G3Q9Y6M4 447 aa7.59□□□□□ -1.2
CTNND1-231ENST00000532463 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GM2AP17900 193 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 SRMP19623 302 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 TAS2R60P59551 318 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 SPCS3P61009 180 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 MEF2AQ02078 507 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ACKR1Q16570 336 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ZNF765Q7L2R6 523 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GRAMD2AQ8IUY3 354 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 IL22RA1Q8N6P7 574 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 MS4A10Q96PG2 267 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 RANBP9Q96S59 729 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 NKX2-4Q9H2Z4 354 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GALNT9Q9HCQ5 603 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 RIMS3Q9UJD0 308 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 TRAPPC1Q9Y5R8 145 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 CROCC2H7BZ55 1655 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 A0A0B4J203 849 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 TMEM127O75204 238 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 CNIH1O95406 144 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 CLDN7O95471 211 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 F7P08709 466 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ZNF25P17030 456 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GPR85P60893 370 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 COL5A1-AS1Q5SY13 56 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 UQCC3Q6UW78 93 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 HMGN2P46Q86SG4 172 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ZNF761Q86XN6 746 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 TUSC5Q8IXB3 177 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 LRRC56Q8IYG6 542 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 NLGN4XQ8N0W4 816 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 SFXN2Q96NB2 322 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GPX7Q96SL4 187 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 NUDT16L1Q9BRJ7 211 aaKnown RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ENKD1Q9H0I2 346 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 OCEL1Q9H607 264 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 NEXMIFQ5QGS0 1516 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 GABRPO00591 440 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 RPLP1P05386 114 aaKnown RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 AGFG1P52594 562 aaKnown RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 EVX2Q03828 476 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 EXOSC2Q13868 293 aaKnown RBP7.58□□□□□ -1.2
CTNND1-231ENST00000532463 HES1Q14469 280 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 ZNF528Q3MIS6 628 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 DEFB134Q4QY38 66 aa7.58□□□□□ -1.2
CTNND1-231ENST00000532463 KDM4DQ6B0I6 523 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms