RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 PDK3Q15120 406 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 LTB4RQ15722 352 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 MAPK11Q15759 364 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 MEP1AQ16819 746 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 ARHGAP11BQ3KRB8 267 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC36A3Q495N2 470 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 TRMT12Q53H54 448 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 DCST2Q5T1A1 773 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.7□□□□□ -1.82
SOX6-214ENST00000531297 MFSD12Q6NUT3 480 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 TNFAIP8L2Q6P589 184 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 TBPL2Q6SJ96 375 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SHISA6Q6ZSJ9 500 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC16A12Q6ZSM3 486 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 NUP54Q7Z3B4 507 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 TIPARPQ7Z3E1 657 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 TMEM179BQ7Z7N9 219 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 ARMC8Q8IUR7 673 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 MISPQ8IVT2 679 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC44A2Q8IWA5 706 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC34A3Q8N130 599 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 ZNF619Q8N2I2 560 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 PAQR4Q8N4S7 273 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 TMEM156Q8N614 296 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 CHDHQ8NE62 594 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 OR7G2Q8NG99 324 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 OR5AK3PQ8NH89 298 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 PNPT1Q8TCS8 783 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 PTPMT1Q8WUK0 201 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 APOBEC4Q8WW27 367 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 TM9SF4Q92544 642 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 FIG4Q92562 907 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 TSLPQ969D9 159 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 CENPNQ96H22 339 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 SGCZQ96LD1 299 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 OR7D2Q96RA2 312 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 CCNL2Q96S94 520 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 CIB1Q99828 191 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 LMF2Q9BU23 707 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 OSBPL11Q9BXB4 747 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 LHPPQ9H008 270 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 GABARAPL1Q9H0R8 117 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SEMA6AQ9H2E6 1030 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 MAGIXQ9H6Y5 334 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 MAP6D1Q9H9H5 199 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 BCL2L10Q9HD36 194 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 ASCL3Q9NQ33 180 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 C8orf4Q9NR00 106 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 UBQLN4Q9NRR5 601 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC22A11Q9NSA0 550 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 DCAF13Q9NV06 445 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 P4HTMQ9NXG6 502 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 VNN3Q9NY84 501 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 USE1Q9NZ43 259 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 SEC14L3Q9UDX4 400 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 ANAPC2Q9UJX6 822 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 PPIEQ9UNP9 301 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 SLC9A8Q9Y2E8 581 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 YARS2Q9Y2Z4 477 aaKnown RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 WDR45Q9Y484 360 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 NUP214P35658 2090 aaPredicted RBP3.7□□□□□ -1.82
SOX6-214ENST00000531297 LAMA1P25391 3075 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 DNAH14Q0VDD8 3507 aa3.7□□□□□ -1.82
SOX6-214ENST00000531297 VPS13AQ96RL7 3174 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 LOC101059948A0A1B0GTJ6 334 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 OR6C70A6NIJ9 312 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 EIF4E1BA6NMX2 242 aaKnown RBP3.69□□□□□ -1.82
SOX6-214ENST00000531297 INAFM1C9JVW0 142 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 PDLIM1O00151 329 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 HMGN4O00479 90 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 SOCS6O14544 535 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 GNGT2O14610 69 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 EI24O14681 340 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 TO15178 435 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 CASC3O15234 703 aaKnown RBP3.69□□□□□ -1.82
SOX6-214ENST00000531297 CLOCKO15516 846 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 PGM3O95394 542 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 DDAH2O95865 285 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 HPRP00739 348 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 PLGP00747 810 aaPredicted RBP3.69□□□□□ -1.82
SOX6-214ENST00000531297 IGKV3-11P04433 115 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 TFAP2AP05549 437 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 BCHEP06276 602 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 UMODP07911 640 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 GNAO1P09471 354 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 COX6A1P12074 109 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 ETFAP13804 333 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 LIFP15018 202 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 IL7RP16871 459 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 S1PR1P21453 382 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 TCEA1P23193 301 aaKnown RBP3.69□□□□□ -1.82
SOX6-214ENST00000531297 KDELR2P33947 212 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 PIGAP37287 484 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 SLC6A8P48029 635 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 RFX3P48380 749 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 ALDH3B2P48448 385 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 EMDP50402 254 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 SSR4P51571 173 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 GPR143P51810 404 aa3.69□□□□□ -1.82
SOX6-214ENST00000531297 NR0B1P51843 470 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms