RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 STX1BP61266 288 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 VLDLRP98155 873 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 ANKRD16Q6P6B7 361 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 BLOC1S3Q6QNY0 202 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 LSMEM1Q8N8F7 131 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 SPATA3Q8NHX4 192 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 NFKBIDQ8NI38 313 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 MAGEE2Q8TD90 523 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-205ENST00000531042 NANOS1Q8WY41 292 aaKnown RBP13.75□□□□□ -0.21
CPSF1-205ENST00000531042 FBXO17Q96EF6 278 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 OXGR1Q96P68 337 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 ZNF317Q96PQ6 595 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-205ENST00000531042 KATNB1Q9BVA0 655 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 NELFAQ9H3P2 528 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 B3GAT1Q9P2W7 334 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-205ENST00000531042 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 SEC14L4Q9UDX3 406 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 RTTNQ86VV8 2226 aa13.75□□□□□ -0.21
CPSF1-205ENST00000531042 A0A096LPE4 126 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 A0A1W2PPZ6 126 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 POLR3GO15318 223 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-205ENST00000531042 OR2T1O43869 369 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 LY6HO94772 140 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 CRYAAP02489 173 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 CSF3P09919 207 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 ARAFP10398 606 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 HOXB1P14653 301 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-205ENST00000531042 ZNF43P17038 809 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 HTR2AP28223 471 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 IDH3AP50213 366 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 SH3BGRP55822 239 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-205ENST00000531042 TUBA1BP68363 451 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 TUBA4AP68366 448 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 ROR2Q01974 943 aaKnown RBP13.74□□□□□ -0.21
CPSF1-205ENST00000531042 C3orf36Q3SXR2 165 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 CHRFAM7AQ494W8 412 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 GCNT6Q5T4J0 391 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 AGBL2Q5U5Z8 902 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 TUBA1AQ71U36 451 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 C10orf111Q8N326 155 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 PROX1Q92786 737 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 SPDL1Q96EA4 605 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 KCNS3Q9BQ31 491 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 EBF4Q9BQW3 602 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 SLC52A3Q9NQ40 469 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 CCDC167Q9P0B6 97 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 GMEB1Q9Y692 573 aa13.74□□□□□ -0.21
CPSF1-205ENST00000531042 A0A1B0GWA3 101 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 RPL36A-HNRNPH2H7BZ11 118 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 AIM2O14862 343 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 TPST1O60507 370 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 IFNA2P01563 188 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 IGLV1-44P01699 117 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 CECR9P0C854 216 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 PPIBP23284 216 aaKnown RBP13.73□□□□□ -0.21
CPSF1-205ENST00000531042 SERPINF1P36955 418 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 CDK6Q00534 326 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 NAAAQ02083 359 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 PAGE3Q5JUK9 113 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 REEP3Q6NUK4 255 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 DHRS4L2Q6PKH6 230 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 KRT73Q86Y46 540 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 DNAJA4Q8WW22 397 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-205ENST00000531042 SLC38A4Q969I6 547 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 CCDC28BQ9BUN5 200 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 SPATA5L1Q9BVQ7 753 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 PRR14Q9BWN1 585 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
CPSF1-205ENST00000531042 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 CA10Q9NS85 328 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 VAPAQ9P0L0 249 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 FBN3Q75N90 2809 aa13.73□□□□□ -0.21
CPSF1-205ENST00000531042 IGKV1D-42A0A075B6H8 117 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 TRAV36DV7A0A075B6V5 113 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 TRBV5-3A0A0A0MS03 114 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 LOC102725191A0A1B0GVB3 256 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 M0R082 166 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 SLC43A1O75387 559 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 IGKV3-15P01624 115 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 USF1P22415 310 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-205ENST00000531042 GRPRP30550 384 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 SNRPD2P62316 118 aaKnown RBP13.72□□□□□ -0.21
CPSF1-205ENST00000531042 ARF1P84077 181 aaKnown RBP13.72□□□□□ -0.21
CPSF1-205ENST00000531042 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 ALG10BQ5I7T1 473 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 ULK3Q6PHR2 472 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 H1FNTQ75WM6 255 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-205ENST00000531042 NET1Q7Z628 596 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms