RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 IL6P05231 212 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 CELA3BP08861 270 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 IDO1P14902 403 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 PAX7P23759 505 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 CALCRP30988 508 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 ACAA2P42765 397 aaKnown RBP13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 P2RY4P51582 365 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 HOXC5Q00444 222 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 CR1LQ2VPA4 569 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 GTDC1Q4AE62 458 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 CEP85LQ5SZL2 805 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 LINGO2Q7L985 606 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 SPATA21Q7Z572 469 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 KDM8Q8N371 416 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 CLIP4Q8N3C7 705 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 MGARPQ8TDB4 240 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 SLC38A5Q8WUX1 472 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF317Q96PQ6 595 aaPredicted RBP13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 SPATA9Q9BWV2 254 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 PLK3Q9H4B4 646 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 TPT1P8Q9HAU6 139 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 GPR45Q9Y5Y3 372 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 LRP5LA4QPB2 252 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 HDAC3O15379 428 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 AKAP8O43823 692 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SLC22A3O75751 556 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 DAOP14920 347 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 NPR2P20594 1047 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SRP14P37108 136 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 CHN2P52757 468 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 ARF1P84077 181 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SNTB2Q13425 540 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SQLEQ14534 574 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 MAPK11Q15759 364 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 EFNB3Q15768 340 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 ZSWIM7Q19AV6 140 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 LIPNQ5VXI9 398 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 EPHX4Q8IUS5 362 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 MFSD8Q8NHS3 518 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 MAGEE2Q8TD90 523 aaPredicted RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 STK35Q8TDR2 534 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 ITCHQ96J02 903 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SNX18Q96RF0 628 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 LINC00470Q9BZP3 86 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 SEC14L4Q9UDX3 406 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 FBXO9Q9UK97 447 aaPredicted RBP13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
CHMP4A-204ENST00000530996 IGHV2OR16-5A0A0B4J2B6 119 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 A0A0G2JPF8 293 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 HNRNPCL3B7ZW38 293 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 C5orf58C9J3I9 102 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 HNRNPCL4P0DMR1 293 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 THBS2P35442 1172 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 THBS4P35443 961 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 NCALDP61601 193 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 CEACAM16Q2WEN9 425 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 C3orf36Q3SXR2 165 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 CARD17Q5XLA6 110 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 KRT80Q6KB66 452 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 WDR93Q6P2C0 686 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 MYPOPQ86VE0 399 aaPredicted RBP13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 MREGQ8N565 214 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 NUP37Q8NFH4 326 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 KTI12Q96EK9 354 aaPredicted RBP13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 BOD1Q96IK1 185 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 NELFAQ9H3P2 528 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 TPK1Q9H3S4 243 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF442Q9H7R0 627 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 CRNNQ9UBG3 495 aaPredicted RBP13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 PCDHB14Q9Y5E9 798 aa13.72□□□□□ -0.21
CHMP4A-204ENST00000530996 M0R082 166 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 M0R3G1 203 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 AIM2O14862 343 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 NPIPB7O75200 414 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 STAMBPO95630 424 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 IGLV1-44P01699 117 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 NQO1P15559 274 aaKnown RBP13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 CBLP22681 906 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 MVDP53602 400 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 CCNIQ14094 377 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 MPP2Q14168 576 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 ADRM1Q16186 407 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 MDP1Q86V88 176 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 BBS10Q8TAM1 723 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF417Q8TAU3 575 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 NEU4Q8WWR8 484 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms