RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ASPNQ9BXN1 380 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 PLSCR4Q9NRQ2 329 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 JKAMPQ9P055 326 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 KLHL13Q9P2N7 655 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 DNAJB9Q9UBS3 223 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 AP4S1Q9Y587 144 aa14.28□□□□□ -0.12
BRK1-201ENST00000530758 TNFRSF11BO00300 401 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 KPNA4O00629 521 aaPredicted RBP14.27□□□□□ -0.13
BRK1-201ENST00000530758 PLPP3O14495 311 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 GPR171O14626 319 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
BRK1-201ENST00000530758 KLF4O43474 513 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 ZG16O60844 167 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 CGAP01215 116 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 IFI30P13284 250 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 MAKP20794 623 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 SLC9A3P48764 834 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 TMEM225Q6GV28 225 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 ZNF770Q6IQ21 691 aaPredicted RBP14.27□□□□□ -0.13
BRK1-201ENST00000530758 C1orf94Q6P1W5 598 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 MRGPRGQ86SM5 289 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 LIX1LQ8IVB5 337 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 TUSC5Q8IXB3 177 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 CDK20Q8IZL9 346 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 LRRC17Q8N6Y2 441 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 OR4K5Q8NGD3 323 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 OR6K3Q8NGY3 331 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 STARD4Q96DR4 205 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 OXGR1Q96P68 337 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 REEP1Q9H902 201 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 TAS2R5Q9NYW4 299 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 B3GAT1Q9P2W7 334 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 SEC14L4Q9UDX3 406 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 TMCC3Q9ULS5 477 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 TMEM5Q9Y2B1 443 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.13
BRK1-201ENST00000530758 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 DVL2O14641 736 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 CLOCKO15516 846 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 PIP5K1CO60331 668 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 PTP4A3O75365 173 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 AGFG2O95081 481 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 CD8BP10966 210 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 PTNP21246 168 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 GTF2E2P29084 291 aaKnown RBP14.26□□□□□ -0.13
BRK1-201ENST00000530758 AGTR1P30556 359 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 RPS4XP62701 263 aaKnown RBP14.26□□□□□ -0.13
BRK1-201ENST00000530758 FHL1Q13642 323 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 FGD3Q5JSP0 725 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 TMEM201Q5SNT2 666 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 HIST2H2BCQ6DN03 193 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 ZFP1Q6P2D0 407 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 CREB3L2Q70SY1 520 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 PXKQ7Z7A4 578 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 ZER1Q7Z7L7 766 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 CCDC71Q8IV32 467 aaPredicted RBP14.26□□□□□ -0.13
BRK1-201ENST00000530758 MCEMP1Q8IX19 187 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 GCNT2Q8N0V5 402 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 OR9K2Q8NGE7 335 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 SSC4DQ8WTU2 575 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 TMEM45BQ96B21 275 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 PIGMQ9H3S5 423 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 NTN4Q9HB63 628 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 VNN3Q9NY84 501 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 HIF3AQ9Y2N7 669 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 EMC9Q9Y3B6 208 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 FLVCR1Q9Y5Y0 555 aa14.26□□□□□ -0.13
BRK1-201ENST00000530758 HCFC1P51610 2035 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 DEAF1O75398 565 aaPredicted RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 PLGP00747 810 aaPredicted RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 HIST1H2ABP04908 130 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 UQCRC1P31930 480 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 NTF4P34130 210 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 IFNGR2P38484 337 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 PCYT1AP49585 367 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 ERFP50548 548 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 FOXD4Q12950 439 aaPredicted RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 PMS2P3Q13401 168 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 MICAQ29983 383 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 SLC25A35Q3KQZ1 300 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 FBXL19-AS1Q494R0 122 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 PPP4R4Q6NUP7 873 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 BTLAQ7Z6A9 289 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 EPHX4Q8IUS5 362 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 C10orf53Q8N6V4 93 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 KRCC1Q9NPI7 259 aaPredicted RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 EMC3Q9P0I2 261 aa14.25□□□□□ -0.13
BRK1-201ENST00000530758 SAMHD1Q9Y3Z3 626 aaKnown RBP14.25□□□□□ -0.13
BRK1-201ENST00000530758 UNC79Q9P2D8 2635 aa14.24□□□□□ -0.13
BRK1-201ENST00000530758 ARRDC5A6NEK1 342 aa14.24□□□□□ -0.13
BRK1-201ENST00000530758 EFCAB9A8MZ26 197 aa14.24□□□□□ -0.13
BRK1-201ENST00000530758 H3BNX3 289 aa14.24□□□□□ -0.13
BRK1-201ENST00000530758 CDC42EP2O14613 210 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms