RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	UPK3A	O75631	287 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	ANP32D	O95626	131 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	HNRNPCL4	P0DMR1	293 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	PRG2	P13727	222 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	IDO1	P14902	403 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	ZNF43	P17038	809 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	GTF2E2	P29084	291 aa	Known RBP	13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	EPHA3	P29320	983 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	ROR2	Q01974	943 aa	Known RBP	13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	MPP2	Q14168	576 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	SQLE	Q14534	574 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	PDCD4	Q53EL6	469 aa	Known RBP	13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	VHLL	Q6RSH7	139 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	MSANTD1	Q6ZTZ1	278 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	LINGO2	Q7L985	606 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	CLIP4	Q8N3C7	705 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	NELFA	Q9H3P2	528 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	RMND5A	Q9H871	391 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	TPT1P8	Q9HAU6	139 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	SLC6A13	Q9NSD5	602 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	ARFGEF3	Q5TH69	2177 aa		13.53	□□□□□ -0.24
TM9SF1-209	ENST00000530468	SLCO1B7	G3V0H7	640 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	FZD7	O75084	574 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SLC43A1	O75387	559 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SLC22A3	O75751	556 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	STAMBP	O95630	424 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TGFA	P01135	160 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	PNMT	P11086	282 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CBR1	P16152	277 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	GIF	P27352	417 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CALCR	P30988	508 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CLDN17	P56750	224 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TUBA1B	P68363	451 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TUBA4A	P68366	448 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TNFAIP8L3	Q5GJ75	292 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	LIPN	Q5VXI9	398 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	IL17REL	Q6ZVW7	336 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TUBA1A	Q71U36	451 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SERPINA11	Q86U17	422 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CCDC36	Q8IYA8	594 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	NEU4	Q8WWR8	484 aa	Predicted RBP	13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SLC25A36	Q96CQ1	311 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TMEM19	Q96HH6	336 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ANKRD27	Q96NW4	1050 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	PAIP2	Q9BPZ3	127 aa	Known RBP	13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	PTDSS2	Q9BVG9	487 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CENPH	Q9H3R5	247 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	THAP1	Q9NVV9	213 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CHST2	Q9Y4C5	530 aa		13.52	□□□□□ -0.25
TM9SF1-209	ENST00000530468	hCG_2039718	K7EN88	272 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ZNF432	O94892	652 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	NPR2	P20594	1047 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ARR3	P36575	388 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	RPS5	P46782	204 aa	Known RBP	13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CHN2	P52757	468 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	EGR4	Q05215	589 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ZNF311	Q5JNZ3	666 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	HHAT	Q5VTY9	493 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ATG16L1	Q676U5	607 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	NXN	Q6DKJ4	435 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	C5orf46	Q6UWT4	87 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CROCCP2	Q86T23	111 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	GPR137C	Q8N3F9	429 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	IL17RD	Q8NFM7	739 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ITCH	Q96J02	903 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	OXGR1	Q96P68	337 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	C12orf10	Q9HB07	376 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ZIM2	Q9NZV7	527 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	RPS6KB2	Q9UBS0	482 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	PCDHB14	Q9Y5E9	798 aa		13.51	□□□□□ -0.25
TM9SF1-209	ENST00000530468	AIM2	O14862	343 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	AKAP8	O43823	692 aa	Known RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	OR2T1	O43869	369 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SNN	O75324	88 aa	Predicted RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	TACSTD2	P09758	323 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	DAO	P14920	347 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	THBS4	P35443	961 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	ARF1	P84077	181 aa	Known RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	HGFAC	Q04756	655 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	C1D	Q13901	141 aa	Known RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CR1L	Q2VPA4	569 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	CEP85L	Q5SZL2	805 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	FAM69A	Q5T7M9	428 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	UGT2A3	Q6UWM9	527 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	C6orf89	Q6UWU4	347 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	KDM8	Q8N371	416 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	PIK3C3	Q8NEB9	887 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	BBS10	Q8TAM1	723 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	HPS1	Q92902	700 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	KTI12	Q96EK9	354 aa	Predicted RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	MAEL	Q96JY0	434 aa	Known RBP	13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	DOK1	Q99704	481 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	RAD21L1	Q9H4I0	556 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	SEC61A2	Q9H9S3	476 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	GPR35	Q9HC97	309 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	BCL2L10	Q9HD36	194 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	B3GAT1	Q9P2W7	334 aa		13.5	□□□□□ -0.25
TM9SF1-209	ENST00000530468	MALRD1	Q5VYJ5	2156 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms