RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	FAM57B	Q71RH2	274 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	HSD11B1L	Q7Z5J1	315 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MCOLN1	Q9GZU1	580 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CAMK2A	Q9UQM7	478 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	COL18A1	P39060	1754 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	DCTN6	O00399	190 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SNAI1	O95863	264 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CHRM4	P08173	479 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	UBL4A	P11441	157 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CPN1	P15169	458 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MAOB	P27338	520 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	HOXA11	P31270	313 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	AKR1C3	P42330	323 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CLDN10	P78369	228 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	HABP2	Q14520	560 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	RTP2	Q5QGT7	225 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MRPL2	Q5T653	305 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TRNP1	Q6NT89	227 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CLEC14A	Q86T13	490 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CNTN4	Q8IWV2	1026 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	FAM58A	Q8N1B3	248 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	HSD17B8	Q92506	261 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	FOXJ1	Q92949	421 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MBOAT4	Q96T53	435 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	FBXO8	Q9NRD0	319 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SLC39A9	Q9NUM3	307 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	C1orf123	Q9NWV4	160 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986		A0A0A6YYC8	382 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PIGBOS1	A0A0B4J2F0	54 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	C17orf105	B2RV13	164 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986		I3L1I5	382 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PTGES	O14684	152 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	GPR137B	O60478	399 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	GPX5	O75715	221 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ATP1B1	P05026	303 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	IGFBP1	P08833	259 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CD79A	P11912	226 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	VIPR2	P41587	438 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	DGCR2	P98153	550 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	LTC4S	Q16873	150 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PDLIM3	Q53GG5	364 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZMAT1	Q5H9K5	638 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PLCXD3	Q63HM9	321 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	BPHL	Q86WA6	291 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	C12orf76	Q8N812	135 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PLPP7	Q8NBV4	271 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MZB1	Q8WU39	189 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SECTM1	Q8WVN6	248 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TMED6	Q8WW62	240 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	DAZAP1	Q96EP5	407 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SERINC2	Q96SA4	455 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	NMNAT3	Q96T66	252 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	DHRS9	Q9BPW9	319 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	KATNB1	Q9BVA0	655 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PTDSS2	Q9BVG9	487 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	WWTR1	Q9GZV5	400 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SPACA1	Q9HBV2	294 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CLDND1	Q9NY35	253 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZNF337	Q9Y3M9	751 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986		A0A1B0GUL6	1792 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	LAMB1	P07942	1786 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	IGKV6D-21	A0A0A0MT36	114 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	C17orf113	A0A1B0GUU1	675 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZC3H12D	A2A288	527 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	VSTM5	A8MXK1	200 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986		B4DXG7	233 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZNF593	O00488	134 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MPPED1	O15442	326 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	XRCC3	O43542	346 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	EDN3	P14138	238 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ELAVL4	P26378	380 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	RAD52	P43351	418 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	EFNA3	P52797	238 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TLE4	Q04727	773 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CRMP1	Q14194	572 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	CLEC12B	Q2HXU8	276 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SLC36A2	Q495M3	483 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZNF765	Q7L2R6	523 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	MRPL21	Q7Z2W9	205 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TMEM151B	Q8IW70	566 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TMEFF1	Q8IYR6	380 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZNF680	Q8NEM1	530 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PIGC	Q92535	297 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	RAB3C	Q96E17	227 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	BMF	Q96LC9	184 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ZNF75A	Q96N20	296 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	ADO	Q96SZ5	270 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	PIGM	Q9H3S5	423 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	FN3KRP	Q9HA64	309 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	TAF9B	Q9HBM6	251 aa		7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	SIDT1	Q9NXL6	827 aa	Known RBP	7.09	□□□□□ -1.27
CTNND1-223	ENST00000529986	BTAF1	O14981	1849 aa		7.09	□□□□□ -1.28
CTNND1-223	ENST00000529986	SIPA1L3	O60292	1781 aa	Predicted RBP	7.09	□□□□□ -1.28
CTNND1-223	ENST00000529986	TRIM77	I1YAP6	450 aa		7.08	□□□□□ -1.28
CTNND1-223	ENST00000529986	EIF3F	O00303	357 aa	Predicted RBP	7.08	□□□□□ -1.28
CTNND1-223	ENST00000529986	EDN1	P05305	212 aa		7.08	□□□□□ -1.28
CTNND1-223	ENST00000529986	CCL5	P13501	91 aa		7.08	□□□□□ -1.28
CTNND1-223	ENST00000529986	KITLG	P21583	273 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms