RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RNF2Q99496 336 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 GAL3ST1Q99999 423 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SIKE1Q9BRV8 207 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 HAUS4Q9H6D7 363 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 KLHL28Q9NXS3 571 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SLC2A8Q9NY64 477 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 B4GALT7Q9UBV7 327 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CELA1Q9UNI1 258 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 COPS3Q9UNS2 423 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 NOSIPQ9Y314 301 aaKnown RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 ATRXP46100 2492 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 EPOPA6NHQ4 379 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 RNF13O43567 381 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 STAMBPO95630 424 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 LGI1O95970 557 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 ETS2P15036 469 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CD1BP29016 333 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 NUP62P37198 522 aaPredicted RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 SLC26A2P50443 739 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 PKNOX1P55347 436 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CLDN8P56748 225 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 RPS15P62841 145 aaKnown RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CDK16Q00536 496 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 ASPHQ12797 758 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 DNAJC3Q13217 504 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 GK3PQ14409 553 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 OR2G6Q5TZ20 316 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 TTC19Q6DKK2 380 aaPredicted RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 C11orf71Q6IPW1 123 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 ARCQ7LC44 396 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 OFCC1Q8IZS5 231 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CEND1Q8N111 149 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CEP112Q8N8E3 955 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 BBS1Q8NFJ9 593 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 OR10H4Q8NGA5 316 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 OR4K14Q8NGD5 310 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CHCHD10Q8WYQ3 142 aaPredicted RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 CXorf40BQ96DE9 158 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 BPIFA3Q9BQP9 254 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 SELENOIQ9C0D9 397 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 DNTTIP1Q9H147 329 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 ANKRD19PQ9H560 264 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 TMEM185BQ9H7F4 350 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 ISG20L2Q9H9L3 353 aaKnown RBP3.28□□□□□ -1.88
C11orf88-204ENST00000529661 FOLH1BQ9HBA9 442 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 STK38LQ9Y2H1 464 aa3.28□□□□□ -1.88
C11orf88-204ENST00000529661 TNRQ92752 1358 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF879B4DU55 563 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 GFYI3L273 518 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 HAS3O00219 553 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 UGT1A9O60656 530 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 SNAPINO95295 136 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 CRYGCP07315 174 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 PRKACAP17612 351 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 PSMB1P20618 241 aaKnown RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 CHMLP26374 656 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 CD1CP29017 333 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 GYG1P46976 350 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 OR3A4PP47883 348 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 RAB9AP51151 201 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF77Q15935 545 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 XKR7Q5GH72 579 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 FHL5Q5TD97 284 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 UTS2BQ765I0 119 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 CENPQQ7L2Z9 268 aaPredicted RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 FAM220AQ7Z4H9 259 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 HSD17B13Q7Z5P4 300 aaPredicted RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 LUZP2Q86TE4 346 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF589Q86UQ0 364 aaPredicted RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 TGIF2LXQ8IUE1 241 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 KATNAL2Q8IYT4 538 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 CCDC71LQ8N9Z2 235 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 OR9A1PQ8NGU1 263 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 FAM81AQ8TBF8 368 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 OR1E3Q8WZA6 343 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 UFD1Q92890 307 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 TRIM62Q9BVG3 475 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 MRPL37Q9BZE1 423 aaKnown RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 AZI2Q9H6S1 392 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 ZDHHC11Q9H8X9 412 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 ABCB10Q9NRK6 738 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 THUMPD1Q9NXG2 353 aaKnown RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 BFARQ9NZS9 450 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 PISDQ9UG56 409 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 RPL36Q9Y3U8 105 aaKnown RBP3.27□□□□□ -1.89
C11orf88-204ENST00000529661 KIF27Q86VH2 1401 aa3.27□□□□□ -1.89
C11orf88-204ENST00000529661 MAP3K19Q56UN5 1328 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 PPIAL4EA0A075B759 164 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 IQANK1A0A1B0GTG1 560 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 OR2AG2A6NM03 316 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 A8MXQ7 604 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 SUPT3HB4E1H0 165 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 C9JVG2 144 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 TRDMT1O14717 391 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms