RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LTBQ06643 244 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 ZNF124Q15973 351 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 MISPQ8IVT2 679 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 KISS1RQ969F8 398 aaPredicted RBP11.49□□□□□ -0.57
TSKU-203ENST00000527881 HAVCR1Q96D42 359 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 JAM3Q9BX67 310 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 ATXN7L1Q9ULK2 861 aaPredicted RBP11.49□□□□□ -0.57
TSKU-203ENST00000527881 GXYLT2A0PJZ3 443 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 C5orf51A6NDU8 294 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 M0QYG6 137 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 M0R036 132 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 IMPA2O14732 288 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 PPM1DO15297 605 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 AMY2AP04746 511 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 CERS1P27544 350 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 TMEM115Q12893 351 aaPredicted RBP11.49□□□□□ -0.57
TSKU-203ENST00000527881 CSRP2Q16527 193 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 NCMAPQ5T1S8 102 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 GAREM2Q75VX8 874 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 OR6N1Q8NGY5 312 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 ADAMTS15Q8TE58 950 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 ISOC2Q96AB3 205 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
TSKU-203ENST00000527881 CHRDQ9H2X0 955 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 TAS2R8Q9NYW2 309 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 USP36Q9P275 1121 aaKnown RBP11.49□□□□□ -0.57
TSKU-203ENST00000527881 DTX4Q9Y2E6 619 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 SLC27A6Q9Y2P4 619 aa11.49□□□□□ -0.57
TSKU-203ENST00000527881 IDSB3KWA1 339 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 H7BY64 318 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 NPC1O15118 1278 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 HLA-AP01891 365 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 SNRNP70P08621 437 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 SELLP14151 372 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 VAMP1P23763 118 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 CASRP41180 1078 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 PCBP4P57723 403 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 PPP2CBP62714 309 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 PPP2CAP67775 309 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 FUT5Q11128 374 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ELAVL1Q15717 326 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ZDHHC12Q96GR4 267 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 RHOVQ96L33 236 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 PRAP1Q96NZ9 151 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ZNF559Q9BR84 538 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 C20orf141Q9NUB4 165 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 SLC35A3Q9Y2D2 325 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 CLN5O75503 358 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 IFNGP01579 166 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 FBP1P09467 338 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 MAKP20794 623 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 GABRR2P28476 465 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ACTA2P62736 377 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ACTG2P63267 376 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 MRM1Q6IN84 353 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 ZNF561Q8N587 486 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 AMER3Q8N944 861 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 OR1J2Q8NGS2 313 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 RNF141Q8WVD5 230 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 TNFSF18Q9UNG2 199 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 ZNF749O43361 778 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 DCNP07585 359 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 NME1P15531 152 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 EIF2S3P41091 472 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 F2RL1P55085 397 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 SKP1P63208 163 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 POU4F2Q12837 409 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 AMZ1Q400G9 498 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 STPG1Q5TH74 334 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 STEAP1BQ6NZ63 245 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 RPL22L1Q6P5R6 122 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 Q6ZVU0 165 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 GRHL3Q8TE85 626 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 OR7D2Q96RA2 312 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 NAA11Q9BSU3 229 aaPredicted RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 SEC11CQ9BY50 192 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 CLEC4EQ9ULY5 219 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
TSKU-203ENST00000527881 OR51B4Q9Y5P0 310 aa11.48□□□□□ -0.57
TSKU-203ENST00000527881 LRRC72A6NJI9 287 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 H7C417 338 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 UBE2CO00762 179 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PAPLNO95428 1278 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 RAB3DO95716 219 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms