RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 FAM71CQ8NEG0 241 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 OR9K2Q8NGE7 335 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 WDR60Q8WVS4 1066 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 ALKBH3Q96Q83 286 aaPredicted RBP8.62□□□□□ -1.03
CAPN1-210ENST00000527699 KCNS3Q9BQ31 491 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 BTBD10Q9BSF8 475 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 BPESC1Q9GZL8 116 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 YIPF3Q9GZM5 350 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 ZNF696Q9H7X3 374 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 RLIMQ9NVW2 624 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 HAO1Q9UJM8 370 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 DCTN4Q9UJW0 460 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 SLC9A8Q9Y2E8 581 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 FKBP7Q9Y680 259 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 MALRD1Q5VYJ5 2156 aa8.62□□□□□ -1.03
CAPN1-210ENST00000527699 NUP214P35658 2090 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 VWC2LB2RUY7 222 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 RNASET2O00584 256 aaKnown RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 GYG2O15488 501 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 UPK3AO75631 287 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SEC14L2O76054 403 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 WNT11O96014 354 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 BPGMP07738 259 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 OR4A8P0C604 315 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 BMP4P12644 408 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 CBLP22681 906 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 CXCR1P25024 350 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 MPGP29372 298 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 CALCRP30988 508 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 S100A3P33764 101 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SERPINF1P36955 418 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 PTDSS1P48651 473 aaKnown RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SLC16A1P53985 500 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 WDR4P57081 412 aaKnown RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SNRPD2P62316 118 aaKnown RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 HOXC5Q00444 222 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SF3A3Q12874 501 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 MAD2L1Q13257 205 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 CCNIQ14094 377 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 CHI3L2Q15782 390 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 TBRG1Q3YBR2 411 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 DNAL1Q4LDG9 190 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 RPS26P11Q5JNZ5 115 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 MRPL2Q5T653 305 aaKnown RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 ATG16L1Q676U5 607 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 TMEM225Q6GV28 225 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 ZNF621Q6ZSS3 439 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 MYPOPQ86VE0 399 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SLC25A36Q96CQ1 311 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 NSL1Q96IY1 281 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SLC38A2Q96QD8 506 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 NR1H4Q96RI1 486 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SIKE1Q9BRV8 207 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 NUF2Q9BZD4 464 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 C20orf27Q9GZN8 174 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 SLC38A1Q9H2H9 487 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 TPK1Q9H3S4 243 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 NARFLQ9H6Q4 476 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 VCX3AQ9NNX9 186 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 PARPBPQ9NWS1 579 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 ETAA1Q9NY74 926 aa8.61□□□□□ -1.03
CAPN1-210ENST00000527699 PRSS51A0A1B0GVH4 220 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 LIPT2A6NK58 231 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TYROBPO43914 113 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 AGR2O95994 175 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 CSF3P09919 207 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 NR2F1P10589 423 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 IL7RP16871 459 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SRP14P37108 136 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 ARFIP2P53365 341 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 UBE2NP61088 152 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 UFM1P61960 85 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 H3F3AP84243 136 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 IL1RL1Q01638 556 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TGFBR3Q03167 851 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 EPS8Q12929 822 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 NPRL3Q12980 569 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 MPP2Q14168 576 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TRIP10Q15642 601 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 ADIPOQQ15848 244 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 ANXA8L1Q5VT79 327 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 ZNF836Q6ZNA1 936 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 KIRREL3Q8IZU9 778 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SVOPLQ8N434 492 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 OR1K1Q8NGR3 316 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 UTP4Q969X6 686 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SLC7A6OSQ96CW6 309 aaPredicted RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 NEURL3Q96EH8 262 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SNX18Q96RF0 628 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 LPAR2Q9HBW0 351 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 PAPOLBQ9NRJ5 636 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 CA10Q9NS85 328 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 PNPOQ9NVS9 261 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms