RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 A0A1W2PNR3 127 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 TCRBV3S1A0A5B6 114 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CPSF4LA6NMK7 179 aaKnown RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 TNFSF13O75888 250 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 PEPDP12955 493 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 EGR1P18146 543 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 SRD5A1P18405 259 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CCNA2P20248 432 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 UGT2B10P36537 528 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ACVR1BP36896 505 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 RASSF2P50749 326 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 POLR2HP52434 150 aaKnown RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM249Q2WGJ8 235 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM176BQ3YBM2 270 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 IFI44LQ53G44 452 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 BEX5Q5H9J7 111 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 AAGABQ6PD74 315 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF613Q6PF04 617 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ULK3Q6PHR2 472 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF704Q6ZNC4 412 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 PIWIL3Q7Z3Z3 882 aaKnown RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 NKAIN4Q8IVV8 208 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ADGRG5Q8IZF4 528 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 PROX1Q92786 737 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 SLCO4A1Q96BD0 722 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 INTS12Q96CB8 462 aaKnown RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF300Q96RE9 604 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 SRXN1Q9BYN0 137 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 MMADHCQ9H3L0 296 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-204ENST00000526430 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 C12orf10Q9HB07 376 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ELOVL5Q9NYP7 299 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CLCF1Q9UBD9 225 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CHRNA9Q9UGM1 479 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 RIMS3Q9UJD0 308 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 RPS6KA6Q9UK32 745 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF281Q9Y2X9 895 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 CADP27708 2225 aa9.67□□□□□ -0.86
NEDD8-204ENST00000526430 A0A096LNT2 108 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF814B7Z6K7 855 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 FTCDNL1E5RQL4 147 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 TNFSF11O14788 317 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF208O43345 1280 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 GPRIN2O60269 458 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 DIRAS1O95057 198 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 TGM6O95932 706 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 CRHP06850 196 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 MAGEA2P43356 314 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 HTR3AP46098 478 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 H3F3AP84243 136 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 SRYQ05066 204 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 SELENBP1Q13228 472 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 CCNIQ14094 377 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 SYT14P1Q58G82 188 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 UBQLNLQ8IYU4 475 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 PIK3C3Q8NEB9 887 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 ATP6V1C2Q8NEY4 427 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 DNAJA4Q8WW22 397 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 OSTF1Q92882 214 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 KTI12Q96EK9 354 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 DNAJA3Q96EY1 480 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 DHRS1Q96LJ7 313 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 KLHL15Q96M94 604 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM204Q9BSN7 226 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 POTEKPQ9BYX7 375 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM27Q9HBJ8 222 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 IL1RAPQ9NPH3 570 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 MEPEQ9NQ76 525 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 RHCGQ9UBD6 479 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 ING1Q9UK53 422 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
NEDD8-204ENST00000526430 LAMP3Q9UQV4 416 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 SLC9A8Q9Y2E8 581 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 ENPP4Q9Y6X5 453 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 V9GYQ6 96 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 TRRAPQ9Y4A5 3859 aa9.66□□□□□ -0.86
NEDD8-204ENST00000526430 PLCE1Q9P212 2302 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 A0A1W2PNV4 684 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 TRAPPC13A5PLN9 417 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 AQP12BA6NM10 295 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 C16orf97H3BN30 126 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 hCG_2039718K7EN88 272 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 CHP2O43745 196 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 CXCL13O43927 109 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 RAMP1O60894 148 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 AQP8O94778 261 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 OR5F1O95221 314 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 SFTPDP35247 375 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 LIMS1P48059 325 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 P2RY4P51582 365 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 ALG10BQ5I7T1 473 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 NHLRC1Q6VVB1 395 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 DEF8Q6ZN54 512 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 TMPPEQ6ZT21 453 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 ESPNLQ6ZVH7 1005 aa9.65□□□□□ -0.86
NEDD8-204ENST00000526430 FKBP9P1Q75LS8 142 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms