RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 MAP3K8P41279 467 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 GRIA1P42261 906 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 KIR2DS2P43631 304 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SULT1E1P49888 294 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 HNMTP50135 292 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 DAP3P51398 398 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 EFNB2P52799 333 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CDH4P55283 916 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CACNG7P62955 275 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 IRX3P78415 501 aaPredicted RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 EWSR1Q01844 656 aaKnown RBP eCLIP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 DMTNQ08495 405 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CCDC173Q0VFZ6 552 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ZNF154Q13106 437 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SELPLGQ14242 412 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 LAGE3Q14657 143 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 RCN1Q15293 331 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SYCP1Q15431 976 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 TPSAB1Q15661 275 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SSX2Q16385 188 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 DPYSL2Q16555 572 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SLC5A12Q1EHB4 618 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 MAJINQ3KP22 176 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ANKDD1AQ495B1 522 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 C10orf120Q5SQS8 335 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CCDC183Q5T5S1 534 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ATF7IP2Q5U623 682 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM71F2Q6NXP2 309 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 KCNIP4Q6PIL6 250 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CCDC137Q6PK04 289 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 HSDL2Q6YN16 418 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 STAC2Q6ZMT1 411 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 PEX26Q7Z412 305 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 PLA2G4DQ86XP0 818 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 VRK2Q86Y07 508 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CCDC65Q8IXS2 484 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 TBC1D21Q8IYX1 336 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CEP112Q8N8E3 955 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ATP6V0D2Q8N8Y2 350 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ANKFN1Q8N957 763 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 NECAB1Q8N987 351 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 OR2T33Q8NG76 320 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 OR52M1Q8NGK5 317 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM3CQ92520 227 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 RAPGEF5Q92565 580 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SMARCD2Q92925 531 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 EFHD2Q96C19 240 aaPredicted RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 DTNBP1Q96EV8 351 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 C12orf66Q96MD2 445 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 AMDHD1Q96NU7 426 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 TGM7Q96PF1 710 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 RBM14Q96PK6 669 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SECISBP2Q96T21 854 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 HIST1H4GQ99525 98 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ZBTB18Q99592 522 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 COPS8Q99627 209 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CITED1Q99966 193 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 NIPSNAP3BQ9BS92 247 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 TMEM121Q9BTD3 319 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SPATA16Q9BXB7 569 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 PKIBQ9C010 78 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SELENOIQ9C0D9 397 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM192AQ9GZU8 254 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 IFI27L2Q9H2X8 130 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SLC25A22Q9H936 323 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 VPS37BQ9H9H4 285 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CAB39LQ9H9S4 337 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ELOVL3Q9HB03 270 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SGK2Q9HBY8 427 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 MRPL47Q9HD33 250 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 UTP6Q9NYH9 597 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 SEC14L3Q9UDX4 400 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 MTRF1LQ9UGC7 380 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 WARS2Q9UGM6 360 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 ASF1AQ9Y294 204 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 PIGLQ9Y2B2 252 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 AK6Q9Y3D8 172 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 YTHDF2Q9Y5A9 579 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 CUX2O14529 1486 aa0.99□□□□□ -2.25
ECHDC1-219ENST00000526299 METP08581 1390 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 MROH7-TTC4A0A0A0MT08 1334 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SH3TC1Q8TE82 1336 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 IGHV3OR16-13A0A075B7E8 117 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 LOC100131303A0A0U1RQF7 123 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 A0A1B0GWB2 263 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CTAGE15A4D2H0 777 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 IDSB3KWA1 339 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 H0Y8G0 127 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 H3BMQ9 156 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 ARPC3O15145 178 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR1F1O43749 312 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SOX15O60248 233 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 FAM189A1O60320 539 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 OR10H3O60404 316 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 CIB2O75838 187 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 DIRAS1O95057 198 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 RCBTB2O95199 551 aa0.98□□□□□ -2.25
ECHDC1-219ENST00000526299 SNAPINO95295 136 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms