RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF610Q8N9Z0 462 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ADPRHL1Q8NDY3 354 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 PFN4Q8NHR9 129 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF417Q8TAU3 575 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF775Q96BV0 537 aaPredicted RBP11.49□□□□□ -0.57
SMPD1-202ENST00000526280 DHRS1Q96LJ7 313 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF587Q96SQ5 575 aaPredicted RBP11.49□□□□□ -0.57
SMPD1-202ENST00000526280 ASPNQ9BXN1 380 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 OPN3Q9H1Y3 402 aaPredicted RBP11.49□□□□□ -0.57
SMPD1-202ENST00000526280 FKRPQ9H9S5 495 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 S100A14Q9HCY8 104 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 CHST11Q9NPF2 352 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 MRPL39Q9NYK5 338 aaKnown RBP11.49□□□□□ -0.57
SMPD1-202ENST00000526280 PROCRQ9UNN8 238 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 RASD1Q9Y272 281 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 HCFC1P51610 2035 aa11.49□□□□□ -0.57
SMPD1-202ENST00000526280 A0A087WUU8 490 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 LOC102725191A0A1B0GVB3 256 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 HTR3EA5X5Y0 456 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ENO4A6NNW6 628 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 PRSS44E7EML9 344 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 MS4A18H0YCH9 400 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 NTF4P34130 210 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 MAGEA2P43356 314 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 SMIM11AP58511 58 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 CHRNB3Q05901 458 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 POU4F3Q15319 338 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 MS4A18Q3C1V0 323 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 GALNT5Q7Z7M9 940 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 GPAT4Q86UL3 456 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ADGRG5Q8IZF4 528 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 RNF113BQ8IZP6 322 aaKnown RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 KDM8Q8N371 416 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 LRRC17Q8N6Y2 441 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ZIC4Q8N9L1 334 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 OR9K2Q8NGE7 335 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 SLC7A13Q8TCU3 470 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 NRG4Q8WWG1 115 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 SGTBQ96EQ0 304 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 OXGR1Q96P68 337 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF347Q96SE7 839 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 C12orf49Q9H741 205 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 NANSQ9NR45 359 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 C20orf141Q9NUB4 165 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 PLEKHB1Q9UF11 243 aaPredicted RBP11.48□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF229Q9UJW7 825 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
SMPD1-202ENST00000526280 TCRBV3S1A0A5B6 114 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 C19orf84I3L1E1 186 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 PLPP3O14495 311 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 PIP5K1CO60331 668 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 OR7A10O76100 309 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 BAG2O95816 211 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 RPSAP08865 295 aaKnown RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 ASAH2BP0C7U1 165 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 UMPSP11172 480 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 PRKCDQ05655 676 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 PMS2P3Q13401 168 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 PODNL1Q6PEZ8 512 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 TFAP2EQ6VUC0 442 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF730Q6ZMV8 503 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 MBOAT2Q6ZWT7 520 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 CREB3L2Q70SY1 520 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 NRMQ8IXM6 262 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 OR5J2Q8NH18 312 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 CANT1Q8WVQ1 401 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 RNASE6Q93091 150 aaKnown RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 LRRC46Q96FV0 321 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 RSRC1Q96IZ7 334 aaKnown RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF570Q96NI8 536 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 FUZQ9BT04 418 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 RBM24Q9BX46 236 aaKnown RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 FOXD3Q9UJU5 478 aaPredicted RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 NOSIPQ9Y314 301 aaKnown RBP11.47□□□□□ -0.57
SMPD1-202ENST00000526280 TESMINQ9Y4I5 508 aa11.47□□□□□ -0.57
SMPD1-202ENST00000526280 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 DHRS12A0PJE2 317 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 MRPL33O75394 65 aaKnown RBP11.46□□□□□ -0.57
SMPD1-202ENST00000526280 GADD45GO95257 159 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 HPRP00739 348 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 HIST1H2ABP04908 130 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 RAP2AP10114 183 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 IFI30P13284 250 aa11.46□□□□□ -0.57
SMPD1-202ENST00000526280 ZNF43P17038 809 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms